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berkeley_reactor_200306_biofilm_scaffold_54892_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 10659..13802

Top 3 Functional Annotations

Value Algorithm Source
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TBS5_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 1046.0
  • Bit_score: 1593
  • Evalue 0.0
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ADV12000.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 1046.0
  • Bit_score: 1593
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family transporter similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 1046.0
  • Bit_score: 1593
  • Evalue 0.0

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3144
ATGTCGCGTTTCTTCATCAACCGGCCGATCTTCGCCTGGGTCATCGTCATCTCGGTGATGCTGGCCGGCCTGCTCGCCATCACCAGCCTGGCGATCGAGCAATATCCGCAGATCGCGCCGCCCTCGGTGTCGATCAGCGCCACCTATTCCGGCGCCGACGCCCAGACGGTGGAGAACTCGGTGACCAAGGTCATCGAGCAGGGCCTGACCGGCATCGACAATCTCGACTACATCACCTCGACCTCGACCTCCTCGGGCAGCGCCTCGATCACGGTCACCTTCACCAGCGCCGCCGATCCCGACGTGGCGCAGATGCAGGTGCAGAACAAGCTGCAGCTCGTCCAGGCGCAGCTGCCCTCGACCGTGCAGAGCACCGGCATCACCGTCTCGAAGGCCTCCACCGGCTTCCTGATGGTGGTGGCCTTCGTCTCCACCGACGGCAAGATGACGGCGACCGACGTCGCCGACTACGTCAAGAGCAGCGTCAACGACACCATCTCGCGCGTCGAGGGCGTCGGCACCACCCAGCTGTTCGGCGGCGGCTATGCCATGCGCATCTGGCTCGACCCGGACAAGCTCGCCAAATATGCGCTGATGCCGGGCGACGTCGCCACGGCCATCCAGGCCCAGAACGTCCAGGTCGCCGCCGGCCAGCTCGGCGACATCCCGCAGCGCAAGGGCCAGCAGCTCAACGTCACCGTGACGGCCCAGAGCCGCCTGCAGACCCCGCAGCAGTTCGAGAACATCATCCTCAAGAGCGCCAGCTCGGGCTCGATCGTCCGGCTCAACGACGTCGCCACCGTGGAGCTCGGGTCCGACAGCTACACCACCAGCTCCAAGTATAGCGGCCTGCCCTCGGCCGGCATGGGCATCAACCTGGCCACCGGCGCCAATGCCATCAACACCTCCAAGGCGGTCAAGGCCACCATCGACAGCCTGGCCTCGACCTTTCCGGAGGGGATGAAGGTCTACTATCCCTACGACACGACCCCGTTCGTGCTCCTGTCGATCGAGGACGTGGTGAAGACGCTGGTGGAGGCCATCGTCCTGGTCTTCCTGGTGATGTTCTTGTTCCTGCAGAACATCCGGGCGACGATCATCCCCACCCTCGCCGTGCCGATCGTGCTGCTCGGCACCTTCGGCGTCCTCGCCGTGCTCGGCTATTCCATCAACACGCTGACGATGTTCGCCATGGTGCTCGCCATCGGCCTCCTGGTCGACGACGCCATCGTCGTGGTCGAGAACGTCGAGCGCGTCATGCAGGAGGAGGGCCTCGGCCCGCGCGAGGCGACGCTGCGCTCGATGGAGGAGATCACCGGCGCCCTGGTCGGCGTCGCCACGGTGCTCTCCGCCGTGTTCGTGCCGATGGCCTTCTATTCCGGCGCGGTCGGCGTCATCTACCGCCAGTTCTCGGTGACCATCGTCTCGGCCATGGCGCTCTCGGTGCTGGTGGCGCTGATCTTCACCCCGGCGCTCTGCGCCACCATCCTCAGGCCGCCGAAGGACCATGCCACCCAGCGCGGCTTCTTCGGCTGGTTCAACCGCACCTTCGACCGCGGCACCCAGGCCTACCGCAACGGCGTCGCCGGGGTGATCAGCCGTTCCTGGCGCTTCCTCGCCGTGTTCCTCCTCATCGGCGGCGGCATGCTCTGGCTGCTCGAGCGCCTGCCGAGCTCCTTCCTGCCGGACGAGGACCGCGGCATCGTCATCACCAGCGTGACGCTGCCGCCGGGCGCGACGCAGGATCGGACGGAGAAGGTGCTCGCCACTGTCCGCGACCACTTCCTCAAGGACGAGAAGGACTATGTCGAGGGCATCTTCACCGTGGTCGGCTTCGGCTTCGGCGGCGCGGGCCAGAATGTCGGCATCGCCTTCGTGCCCCTGAAGGACTTCAGCGTCCGCACCGACCCGAACGGCAAGGCGCAGGCCATCGTCGGCCGGGCGATGAAGGCCTTCTCGCAGATCCGCGACGGCATGGTGTTCGCCCTGACGCCGCCGGCCGTCACCGGCTTCGGCAACACCAGCGGCTTCGACTTCTACCTGCAGGACCTGAACGGCGCAGGGCACGACAAGCTGATGGAGACGCGCAACCTGCTGCTCGGCATGGCGGCGAAGAGCCCGCTCCTGGTCGGCACGCGGCCCAACGGCCAGGAGGATACGCCGCAATATTCCGTCAACATCGACCAGGAGAAGGCGAGCGCCCTCGACCTCAGCCTGTCCGACATCACCACCACGCTGTCGACGGCCTGGGGCGGCACCTATGTCAACGACTTCATCGACCGCGGCCGCGTCAAGAAGGTCTATCTCCAGTCGGCCGCGGATTTCCGCATGCAGCCGGAGGACCTCGGGCGCTGGTATGTCCGCAACTCCGACAACGCCATGGTGCCCTTCACCGCCTTCGCCACCGGCAAGTGGAGCTACGGCTCGCCGCGCCTGGAACGCTACAACGGCGCCTCGGCAGTGGAGATCCAGGGGGCTGCCGCGCCGGGCGTCAGCTCGGGCGATGCGATGAACGCCATCGACGGCTTCGTGGCGCAGCTGCCGCCCGGCTATCGGCACGAATGGACCGGCCTCTCCGCCCAGGAGCGGCTGTCGGGCAGCCAGGCGACGCAGCTCTACCTGCTCTCGGCCCTGGTGGTGTTCCTGGCCCTCGCCGCCCTCTACGAGAGCTGGTCCATCCCCTTCGCCGTCATGCTGTCCGTGCCGATCGGCATCTTCGGCGCGGTGCTGGCGGCGACGCTGTTCGGCCAGTCCAACGACGTCTATTTCAAGGTCGGCCTGCTGACCACGATCGGCCTCGCCGCCAAGAACGCCATCCTGATCGTCGAATTCGCCATGGAGCAGCAGAAGGCCGGCAAGGGCCTGGTCGAGGCGACGCTGGAGGCCTCGCGCCAGCGCCTGCGCCCGATCCTGATGACCTCCTTCGCCTTCATCCTCGGCGTGACGCCGCTCGCCATCGCCTCGGGCGCCGGCTCGGGCAGCCAGAACTCGATCGGCATCGGCGTGATGGGCGGCATGATCGCCGCGACCGTGCTCGGCATCTTCTTCATCCCGCTCCTCTTCGTCGCGGTCTGCCGCGTGTTCTCGCGGCGCGCCGCGCCCGCGGACCGGGCCGACACGACTCCAGCCGCCGGAACCCCATGA
PROTEIN sequence
Length: 1048
MSRFFINRPIFAWVIVISVMLAGLLAITSLAIEQYPQIAPPSVSISATYSGADAQTVENSVTKVIEQGLTGIDNLDYITSTSTSSGSASITVTFTSAADPDVAQMQVQNKLQLVQAQLPSTVQSTGITVSKASTGFLMVVAFVSTDGKMTATDVADYVKSSVNDTISRVEGVGTTQLFGGGYAMRIWLDPDKLAKYALMPGDVATAIQAQNVQVAAGQLGDIPQRKGQQLNVTVTAQSRLQTPQQFENIILKSASSGSIVRLNDVATVELGSDSYTTSSKYSGLPSAGMGINLATGANAINTSKAVKATIDSLASTFPEGMKVYYPYDTTPFVLLSIEDVVKTLVEAIVLVFLVMFLFLQNIRATIIPTLAVPIVLLGTFGVLAVLGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVMQEEGLGPREATLRSMEEITGALVGVATVLSAVFVPMAFYSGAVGVIYRQFSVTIVSAMALSVLVALIFTPALCATILRPPKDHATQRGFFGWFNRTFDRGTQAYRNGVAGVISRSWRFLAVFLLIGGGMLWLLERLPSSFLPDEDRGIVITSVTLPPGATQDRTEKVLATVRDHFLKDEKDYVEGIFTVVGFGFGGAGQNVGIAFVPLKDFSVRTDPNGKAQAIVGRAMKAFSQIRDGMVFALTPPAVTGFGNTSGFDFYLQDLNGAGHDKLMETRNLLLGMAAKSPLLVGTRPNGQEDTPQYSVNIDQEKASALDLSLSDITTTLSTAWGGTYVNDFIDRGRVKKVYLQSAADFRMQPEDLGRWYVRNSDNAMVPFTAFATGKWSYGSPRLERYNGASAVEIQGAAAPGVSSGDAMNAIDGFVAQLPPGYRHEWTGLSAQERLSGSQATQLYLLSALVVFLALAALYESWSIPFAVMLSVPIGIFGAVLAATLFGQSNDVYFKVGLLTTIGLAAKNAILIVEFAMEQQKAGKGLVEATLEASRQRLRPILMTSFAFILGVTPLAIASGAGSGSQNSIGIGVMGGMIAATVLGIFFIPLLFVAVCRVFSRRAAPADRADTTPAAGTP*