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berkeley_reactor_200306_biofilm_scaffold_54892_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(30281..32473)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GCL5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 716.0
  • Bit_score: 773
  • Evalue 1.30e-220
ABC transporter {ECO:0000313|EMBL:KJC58937.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 717.0
  • Bit_score: 780
  • Evalue 2.00e-222
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 716.0
  • Bit_score: 773
  • Evalue 3.80e-221

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2193
ATGCTCCGTTCGGCGAAACGAAGCCGGCAAGCCGGCAAACGCAGGAGCACCCCGACCGTCTTCCAGATGGAAGCGGTCGAATGCGGGGCGGCGGCGCTCGCCATGATCCTGGCCTTCCATCGCCGATGGGTTCCGCTGGAAGAGCTGCGCTTTCGATGCGGGGTCTCGCGTGACGGCACCAAGGCCAGCAACATCCTCAAGGCTGCCCGGCACTACGGCCTGGCGGCCAAGGGGTTCCGCAAGGAGCCGGAAGACCTGACGTCGCTTCCCATCCCGTCGATCATCCATTGGAACTTCAATCATTTTGTCGTTTTCGAAGGATTCGTCGGGAAATGGGCCTATCTCAACGATCCCGCGATCGGCCGCTGCCGCGTCGACGCGGCGGAGTTCTCCGAATCCTTCACCGGCGTGGTCCTGGCCATGGAGCCGGCCGCCGGCTTTCGGGCCGAGGGCTCGCCACCCAGCCTGCTCGGGTTGCTGTGGCAGAGGTTGCGCGGGTCGGGCGACGGCGTGGCGCTGGTGCTGCTTCTCAGCGTGCTGCTGGCGATTCCCGGCATCCTCACGCCGCTGTTCGCCAAGATCTTCATCGACGACGTCCTGATCGGCCGGCTGGACGGATGGCTCGCTCCGCTGTTCCTGGGCATGGCGGCGACCGCGGCGGTCCGCGCGGCCCTGATCTTCGTGCAGACCCATTATCTCCTGCGCCTGGAGACGAAGCTCGCCCTGTCGCTCGGCAGCCGCTTCGTCTGGCACCTCCTGCGCCTGCCCATGGTCTTCTTCACGCAGCGGCATGCCGGCGATATCGCCAATCGCATCCAGGCCAATGACGACATGGCCCGGCTGCTGTCGGGCGGGCTCGCGACGCTGGCGCTCAGCCTGGTCACGTCCCTCGTGTTCCTGGCGGCGATGGCCGCCTTCAACCCCGGCCTGACGGCGATCGTGGTGCCGATCGCGTTGATCGACATCGCCGCCTTGTGGCTCGCCTGGCGGCGGCGGGAGGCGACGGCCCAGCGCCTCATGAAGGACCGAGGCCAGCTGATGAGCGCCACGGTCGGCATCGTCCGTGCGATCGAGACGGTGAAGGCGAGCGGACTGGAGCAGGATGCCTTCGGGCGCTGGGCGGGGCATCACGCCCGGACCATGGCCGCCAGCCGGGATCTCGGCCGCTCAGCGGCGATGCTGGATGCGGTGCCTCCTCTGCTTGCCGGCCTCGGGCACTGCGCCTTGCTCGGGGTCGGCAGCCTCGAGGTGATGGCCGGGCGAATGTCGGTCGGCGACCTCGTCGCCTTCCTGGCTCTCGCCGCGGCGTTCTCGGACCCGGTCGGACAGATGCTCGGCATCGGCGCGACCCTGCAGGAGATGAGGGGCGGGCTTGCCAATATCCGCGATGTCCTGGCCAGCCCGCCCGACCCGCGGCTCGCCCCATCCGACGACCGGCAGGCCGCCGCGCCCATGCCCCCTCGGACCACGCGCCTGCGTGGGCAACTGGACCTGCACGCCGTCACGTTCGGCTACAATCCGCAGGAGCCGCCGCTCATCGCCGATTTCAGCCTCTCGGTGCAGCCGGGCATGCGCATCGGGATCGTCGGGGCCTCGGGCAGCGGCAAGTCGACGCTCGGGCGGCTGATCAGCGGCCTCCACGTGCCGTGGTCGGGGAGCATCCTGATCGACGGCGTGGCGGCGCAGGACATTCCCCGGCCGATCCTCGCGAGGTCGCTCGCCTATGTGGATCAGGACATCTTCCTGTTCCAGGGCAGCGTCAGGGACAATGTCACCCTTTGGGACCGCAGCCTCGAGGATGCGGCCGTGCTGCGGGCCCTCAAGGATGCGGCCGTGTTCGAGGAGATCACGGTCAGGCCGGGGCTCCAGCACGCGCATGTCGCGGAGGCCGGCATCAATTTCAGCGGCGGCCAGCGCCAGCGTCTCGAGATCGCGCGTGCGCTGGTGGAGGATCCGGCCATCCTCGTCCTCGACGAGGCGATGGCGGCGCTGGATCCGATCGTCGAGCAGGCGATCGACGACAATATCCGGCGACGGGGCTGCACCTGCATCATCATCGCCCATCGGCTGAGCACGATCCGCGATTGCGATGAGATCGTGATGCTGCGGGCCGGACGGGTGATCGGGCGCGGGCGGCATCCGGAGCTGCTCGCGAGCTGCCCGGACTACAGGCACCTCATCGATGCCCAATAG
PROTEIN sequence
Length: 731
MLRSAKRSRQAGKRRSTPTVFQMEAVECGAAALAMILAFHRRWVPLEELRFRCGVSRDGTKASNILKAARHYGLAAKGFRKEPEDLTSLPIPSIIHWNFNHFVVFEGFVGKWAYLNDPAIGRCRVDAAEFSESFTGVVLAMEPAAGFRAEGSPPSLLGLLWQRLRGSGDGVALVLLLSVLLAIPGILTPLFAKIFIDDVLIGRLDGWLAPLFLGMAATAAVRAALIFVQTHYLLRLETKLALSLGSRFVWHLLRLPMVFFTQRHAGDIANRIQANDDMARLLSGGLATLALSLVTSLVFLAAMAAFNPGLTAIVVPIALIDIAALWLAWRRREATAQRLMKDRGQLMSATVGIVRAIETVKASGLEQDAFGRWAGHHARTMAASRDLGRSAAMLDAVPPLLAGLGHCALLGVGSLEVMAGRMSVGDLVAFLALAAAFSDPVGQMLGIGATLQEMRGGLANIRDVLASPPDPRLAPSDDRQAAAPMPPRTTRLRGQLDLHAVTFGYNPQEPPLIADFSLSVQPGMRIGIVGASGSGKSTLGRLISGLHVPWSGSILIDGVAAQDIPRPILARSLAYVDQDIFLFQGSVRDNVTLWDRSLEDAAVLRALKDAAVFEEITVRPGLQHAHVAEAGINFSGGQRQRLEIARALVEDPAILVLDEAMAALDPIVEQAIDDNIRRRGCTCIIIAHRLSTIRDCDEIVMLRAGRVIGRGRHPELLASCPDYRHLIDAQ*