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berkeley_reactor_200306_biofilm_scaffold_54892_30

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(36711..37436)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RecO n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LUK5_METRJ similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 232.0
  • Bit_score: 301
  • Evalue 4.90e-79
DNA repair protein RecO similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 232.0
  • Bit_score: 301
  • Evalue 1.40e-79
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 232.0
  • Bit_score: 301
  • Evalue 6.90e-79

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Taxonomy

Methylobacterium radiotolerans → Methylobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCAATGGACCGACGATGCCTTCGTGCTCGGCGTGCGCCGCCACGGCGAGTCGAGCGTGATCCTGGAAGCGTTGACGCGCGAGCACGGCCGCCATCTCGGCCTGGTGCGCGGTGGGCGCTCCAGAACGCTGCAGCCGGTGCTGCAGCCGGGCAATGCGGTGCACCTCACCTGGCGGGCGCGCATCGACGAGCAGCTCGGCTCCTACGCGGTGGAGGGCCTGGCGCTGCATGCCGGGCGGCTGATGGGCTCGCGCCTGGCGCTCTATGCCGTGACCCACGTGGCGGCGCTGGTGCGGCTCCTGCCGGAGCGCGACCCGCATCCGGCGCTGCACGAGGCGCTCGGCCCCCTGTTCGAGGCGCTGGCCGACGAGGCAGCGGCGCCGGCGCTGGTGGCGCGGCTGGAGCTCGCCATGCTCACCGAGCTCGGCTTCGGTCTCGACCTCTCGGCCTGCGCCGTGACCGGGGCGACGCAGGACCTGATCTATGTCTCGCCCAGGAGCGGCCGGGCGGTGAGCCGCGCGGCCGGTGCGCCCTGGAGCGACCGGCTGCTGCCGCTGCCGGCCTTCCTGCGCGGCCTCGGCGAGCCGCGGGCGGAGGACGTGGCCGGCGCCTTCCGCCTCACCGGCTTCTTCCTGCAGCGGGACGTGTTCGGCCCGCGCGGCCTCGTCATGCCCGAGGGCCGGCAGGCCCTGGTCGATGCGGCGGCCGGCGGCCCGGCCCGGTGA
PROTEIN sequence
Length: 242
MQWTDDAFVLGVRRHGESSVILEALTREHGRHLGLVRGGRSRTLQPVLQPGNAVHLTWRARIDEQLGSYAVEGLALHAGRLMGSRLALYAVTHVAALVRLLPERDPHPALHEALGPLFEALADEAAAPALVARLELAMLTELGFGLDLSACAVTGATQDLIYVSPRSGRAVSRAAGAPWSDRLLPLPAFLRGLGEPRAEDVAGAFRLTGFFLQRDVFGPRGLVMPEGRQALVDAAAGGPAR*