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berkeley_reactor_200306_biofilm_scaffold_63135_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(1094..2470)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MatE n=1 Tax=Xanthobacteraceae RepID=UPI00037B6E3C similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 448.0
  • Bit_score: 490
  • Evalue 1.10e-135
MATE efflux family protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 435.0
  • Bit_score: 481
  • Evalue 1.40e-133
MATE efflux family protein {ECO:0000313|EMBL:ADH91282.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 435.0
  • Bit_score: 481
  • Evalue 7.10e-133

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGCCGGACAGCGCCACCACCCTCGACGCCGCCGCGCCGCCCGAGCGCGCGGCGCCCAAGTTCGTCCACGGCTCGACGGCCCGGCACGTCGTGGTCATGACCGCGACCGCCTCGCTCGGCCTGATGGCGATCTTCGTCGTCGACCTGCTCAACCTGTTCTACATCGCCCGGCTCGGCGACACCGTGCTGACCGCGGCGGTCGGCTATGCCTCGACCATCCTGTTCGTCACCACCTCGATCTGCATCGGCCTGATGATCGCCACCGGCGCGCTGTGCTCGCGCGCGCTCGGGGCCGGCGACCGGCCGCTGGCGCGGCGCCTCGCCGCCTCCTCGATCTTCTGGATGTTCGCGGTCACCATGGCGGTCGCCCTGGTGTCGCTGCCGCTGATCCGGCCGATGCTCGCCGCGCTCGGCGCCATGGGGCGCACGCTCGATGTGGCCGCGACCTATCTCACCATCGCCACGCCGACCGTGCCGGTCATGGGCCTCGGCATGGCCTTCGCCGGAGTGCTGCGCTCGGTGGGCGATGCCCGGCGCGCCATGTATGTGACGCTGTCGGGGGCCGTGGTCGCGGCCGTGCTCGATCCGCTCCTGATCCTGTTCCTCGGCTGGGGCGTGCCGGGCGCCGCCGTCGTGCTGGTGTTCTCGCGCCTGGTGGTGGCCTATGTCGGCTATCGCGGGGCGGTGCGCCTGCACGACCTCGTGGCCCGGCCGACGCTCGCCGCGGCCCGTGCCGATGCGCCGGCGATCGCCGCGATCGCCGGGCCGGCGGTGCTGGCCACCCTCGCCACGCCCGTCGCCGCCGGCTACATGACGGCGGTGCTGTCGCCGTTCGGCGATGCCGCCATCGCCGCCAATGCGGTGATGGGGCGGCTGGTGCCGGTATGCTTCGGCGCGGTCTTCGCGCTCTCGGGCGCGGTCGGCCCGATCCTCGGCCAGAATCTCGGCGCCGGGCGGCTCGACCGGGTGCGCCGCACGCTCACGGATTCCTTCCTGCTCGTCACCGCCTATGTCGTCGCCGTCTGGGTGGTGCTGGCCCTGGCGCGCCACGGCGTGGTGGCGGTGTTCGGCATCACCGACCGCGGCGCCGCGGCGCTGGTCGAGTTCTTCTGCCTGTTCGTCGCAGGCTCCTGGGTGTTCCACGGCCTGCTCTTCGTCGCCAATGCCGCCTTCAACAATCTCGGCTTTCCCCTCACCTCCACCGGCTTCAACTGGGGCAAGGCGACGCTCGGCACCGTGCCCTTCGCCATGGCCGGCGCCGCCTGGTGGGGCGCGGAGGGAGCGCTGGCCGGGCAGGGCGTCGGCGCCGTGCTGTTCGGCCTCGCCGCCGTCCGGGCCGCCTATCGGGCGGTCGGCCGCCTCGCAGTCGGCGATTGA
PROTEIN sequence
Length: 459
MPDSATTLDAAAPPERAAPKFVHGSTARHVVVMTATASLGLMAIFVVDLLNLFYIARLGDTVLTAAVGYASTILFVTTSICIGLMIATGALCSRALGAGDRPLARRLAASSIFWMFAVTMAVALVSLPLIRPMLAALGAMGRTLDVAATYLTIATPTVPVMGLGMAFAGVLRSVGDARRAMYVTLSGAVVAAVLDPLLILFLGWGVPGAAVVLVFSRLVVAYVGYRGAVRLHDLVARPTLAAARADAPAIAAIAGPAVLATLATPVAAGYMTAVLSPFGDAAIAANAVMGRLVPVCFGAVFALSGAVGPILGQNLGAGRLDRVRRTLTDSFLLVTAYVVAVWVVLALARHGVVAVFGITDRGAAALVEFFCLFVAGSWVFHGLLFVANAAFNNLGFPLTSTGFNWGKATLGTVPFAMAGAAWWGAEGALAGQGVGAVLFGLAAVRAAYRAVGRLAVGD*