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berkeley_reactor_200306_biofilm_scaffold_63135_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(6200..6418)

Top 3 Functional Annotations

Value Algorithm Source
CcdB-like toxin protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXE3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 72.0
  • Bit_score: 54
  • Evalue 4.10e-05
CcdB-like toxin protein {ECO:0000313|EMBL:CAM75300.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 72.0
  • Bit_score: 54
  • Evalue 5.70e-05
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 72.0
  • Bit_score: 52
  • Evalue 4.40e-05

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Taxonomy

Magnetospirillum gryphiswaldense → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGAGACACGCGTTGTCGCGCCGTTGGCACGGATTCCGCCGTTCAGGCCCATCCGGATCCTGCAGCCGGTGATCGAGATCGTCGGAGCAGATCATGCCTTGGTCGCCAACGAGATGGCCGCCGTGCCCCGGAAGATGCCGGGCCCGATCGTCTCGTCGGGGCGCCACTGCCGCTACGAGATTTTGCGGGCTATCGACCTGATCTTCACCGGCGTTTGA
PROTEIN sequence
Length: 73
METRVVAPLARIPPFRPIRILQPVIEIVGADHALVANEMAAVPRKMPGPIVSSGRHCRYEILRAIDLIFTGV*