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berkeley_reactor_200306_biofilm_scaffold_70490_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17716..18606)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, sigma-70 family protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HW77_ACHXA similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 297.0
  • Bit_score: 334
  • Evalue 8.40e-89
RNA polymerase sigma factor sigma-70 family protein similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 297.0
  • Bit_score: 334
  • Evalue 2.40e-89
RNA polymerase sigma-70 factor, sigma-70 family protein 2 {ECO:0000313|EMBL:ADP17557.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 297.0
  • Bit_score: 334
  • Evalue 1.20e-88

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Taxonomy

Achromobacter xylosoxidans → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGCGGACGCGGACGGCACCGCGGCGTTCGAGCCGCACCGGCCGCGGCTGTTCCGCCTCGCCTACCGCATGCTCGGCTCGGTGGCGGACGCCCAGGACGCGGTGCAGGAGGCCTGGCTGCGCTGGCAGGCGGCCGACCGCGCCGTCGTCGCCAATGCCGGCGCCTTCCTCGCCCGCACCGTGACGCGGCTCTGCCTCGACCAGCTCAAATCCGCCCAGGCCCGGCGTGAGACCTATGTCGGGCCGTGGCTGCCGGAGCCGCTGATCGAGGCAGCCGGCACCGCGGACCAGGCGGCCGGCGAGGCCGGGCTCGACCTCTCCGTGACGCTGATGCTGGCCCTCGAGCGCCTGTCGCCGCTGGAGCGGGCGGCGTTCCTGCTGCACGACGTGTTCGATGCGAGCTTCGAGGAGGTCGCGGCAGCGATCGGACGCACGCCCGTGGCCTGCCGGCAGATGGCGGCCCGCGCCCGGCGCCATGTGCGCGAGGCCCGGCCGCGCTTCGCCGTGGCCTCGGACGAGGGTGAGCGCATCGCCCGGGCCTTCCACCAGGCGACGGTCAGCGGCGATGCCGGCACGCTCGCCCGCATCCTCGCCGAGGGCGTGGTCCTGACCTCCGACGGCGGCGGCAAGGTGCTGGCGCTGCTCAACCCGATCGCCGGACGCGACAAGGTCCAACGCTTCTTCCTCAGCGTCGCCGAGAAGATCGCGGGGCACGGGCTGGGCTCGCCGGCGATGCGGATGCGCTGGATCAACGGCTCGCCCGGCCTGGTGCAGCGCTGGCCCGACGGCACGCTGCAGACCACCACCCTCGACGTCGCGGAGGGCCGGATCGTCGCCATCCACATCGTCCGCAACCCCGACAAGCTCCGGCACATCGAGCCGCCGACCTGA
PROTEIN sequence
Length: 297
MADADGTAAFEPHRPRLFRLAYRMLGSVADAQDAVQEAWLRWQAADRAVVANAGAFLARTVTRLCLDQLKSAQARRETYVGPWLPEPLIEAAGTADQAAGEAGLDLSVTLMLALERLSPLERAAFLLHDVFDASFEEVAAAIGRTPVACRQMAARARRHVREARPRFAVASDEGERIARAFHQATVSGDAGTLARILAEGVVLTSDGGGKVLALLNPIAGRDKVQRFFLSVAEKIAGHGLGSPAMRMRWINGSPGLVQRWPDGTLQTTTLDVAEGRIVAIHIVRNPDKLRHIEPPT*