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berkeley_reactor_200306_biofilm_scaffold_83611_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(799..2616)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate binding protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NPL8_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 29.8
  • Coverage: 677.0
  • Bit_score: 291
  • Evalue 1.30e-75
ABC transporter, substrate binding protein {ECO:0000313|EMBL:EAV45381.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.8
  • Coverage: 677.0
  • Bit_score: 291
  • Evalue 1.80e-75
mammalian cell entry related domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 673.0
  • Bit_score: 277
  • Evalue 5.40e-72

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Taxonomy

Labrenzia aggregata → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1818
TTGGAGACGCGCGCCAACAACGCCCTGATCGGCCTGTTCACCTTGGCGGTGATCGCCGCGGCGCTCGGCTTCGTCGTGTGGTTCGCGCGGCTGGCCGACAACACCAAGGCCAACCATTACCAGGTGGTGTTCTCCGGCTCGATCAGCGGCCTCACCGTCGGCTCGAGCGTGCTGTTCAACGGCATCCGCGTCGGCCAGGTCGACTCGCTCGACCTGATGCCGGACGACCCCTCGCGCGTCGTCGGCCGGATCACGGTGAAGGAGAGCACCCCGGTCAAGGTCGACACAAGGGCGCGCATGGAGTTCCAGGGCCTCACCGGCGGCGCCTATATCCAGCTCTATGGCGGCTCCTCCAACGCCCCGCCTCTGGAGCCGCCGCCGGACCAGGAATTCGCCACCATCTATGCCGAGCGCTCGGAGCTGCAGAATCTCGTCGACGGCGCGCGCGACACGGTGACCCAGGCGGCGCAGACGCTGACCCGCATCGACGAGTTCATCCGCAAGAACGAGGGCGACCTCACGGCCACGGTCGGCAATGTCCGCACCTTCACCCAGGCGCTCGCCAGCAATTCCGGCGCGATCACCGGCTTCCTGCAGACCACCGGGGACGCAGCCAAGCGCATCGGCGAGCTCGCCGACAGCCTCAACACCATGAGCGGCGATCTCCAGGCCCTGATCAAGGCGGTCGACCCCGCCAAGATCGACCGCATCGTCGGCAACGTCACCGCCGCCTCCGACCAGTTGAAGACCTTCGCGCAGGCCTTCGACGCCGCCAAGGCGCAGGCCGCCATCGCCAATGTCGAGGCCTTCACCCAGGCGCTGGCGGATTCGAAGGGCCAGATCACCGCGTTCGCCACCGACGCCGCCGGCGTGGCCGCCAAGCTCAACACGATGGCGCCGAAGCTGGAGGCGGGGCTGGATTCGATCAACAAGGTCGTGGGTGCCATCGACGGCGCCAAGATCGGCCGGACCGTCGACAATATCGACAAGTTCGCCGCCGTCATCGGCGACAATTCCGCCGAGATCGACGGCGTCCTCAAGGATACGCGCAAGCTCTCGGCCGACCTCGCCGGCATGACGCCGAAGCTCGCCACCGCCTTCGACAACATCAACCGGGTGGTCGCGGCGATCGACAGCGCCAAGGTCGACCGGGTCCTGACCAATGTCGACAAGGTCGTGGGCGCCGTCGACAGCGCCAAGGTCGGCCAGGCCGTCGACAACATCAACAAGTTCGCCGCCGTCATCGGCGACAATTCCGCCGAGATCGACGGCGTCCTCAAGGATACGCGCAAGCTCTCGGCCGACCTCGCCGCCATGACGCCGAAGCTCGCCGCCACCTTCGACAGCATCAACCGGGTGGCCTCGGCGATCGACGGCCCCAAGGTCGACCGGGTCTTGACCAATGTCGATAAGTTCGCCCAGACGCTCGGCGATTCCACCCAGAAGGTGCAGGGCTTCATCAACGATGCCAGCGATGTCGGCCGGAAGCTGAACGCCACCGCCGACCGGCTGGACGTGGTGCTGAAGAACATCGAGACCATGACCAGCAGCCCCGAAGGCAAGGGCATGTTCGCCGAGATCACCGAGACCGCGCGCTCGATCCGGACGCTGGCGCAGAACCTCGACTCCCGCACCCAGGAGCTGTCGAAGAACCTCAACCAGTTCAGCGGCGCCGGCCTGCGCGACGTGCGCGAGCTCGCCACCGACGGGCAGAAGACGCTGCGCGACATCCAGCGCACGCTCAACAGCCTGCAGCGCAACCCGCAGCAATTGCTGCTGGGTCCGAAGTCGACCATTCCCGACTACAAGGGACAATGA
PROTEIN sequence
Length: 606
LETRANNALIGLFTLAVIAAALGFVVWFARLADNTKANHYQVVFSGSISGLTVGSSVLFNGIRVGQVDSLDLMPDDPSRVVGRITVKESTPVKVDTRARMEFQGLTGGAYIQLYGGSSNAPPLEPPPDQEFATIYAERSELQNLVDGARDTVTQAAQTLTRIDEFIRKNEGDLTATVGNVRTFTQALASNSGAITGFLQTTGDAAKRIGELADSLNTMSGDLQALIKAVDPAKIDRIVGNVTAASDQLKTFAQAFDAAKAQAAIANVEAFTQALADSKGQITAFATDAAGVAAKLNTMAPKLEAGLDSINKVVGAIDGAKIGRTVDNIDKFAAVIGDNSAEIDGVLKDTRKLSADLAGMTPKLATAFDNINRVVAAIDSAKVDRVLTNVDKVVGAVDSAKVGQAVDNINKFAAVIGDNSAEIDGVLKDTRKLSADLAAMTPKLAATFDSINRVASAIDGPKVDRVLTNVDKFAQTLGDSTQKVQGFINDASDVGRKLNATADRLDVVLKNIETMTSSPEGKGMFAEITETARSIRTLAQNLDSRTQELSKNLNQFSGAGLRDVRELATDGQKTLRDIQRTLNSLQRNPQQLLLGPKSTIPDYKGQ*