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berkeley_reactor_200306_biofilm_scaffold_83611_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5784..7487

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00037B7470 similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 416.0
  • Bit_score: 217
  • Evalue 2.90e-53
caspase-1, p20 similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 422.0
  • Bit_score: 216
  • Evalue 1.10e-53
Rhodobacter sphaeroides 2.4.1 plasmid C, complete sequence {ECO:0000313|EMBL:ABA81547.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 422.0
  • Bit_score: 216
  • Evalue 5.30e-53

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1704
ATGCTGCAGCACCTCAAGCTCGGGTTCGGTGTTCTCGTGCTGCTCTGCGCCCTGGCGTCGCCGGCCTCCGCCGCCAGGCTCGCCCTGGTCATCGGCAACGACGACTACGTCTCGGTGACCCGGCTCGAGCGAGCGGTGGCCGACAGCCAGGCCCTGCGCACGGCCCTGGAGAAGCTCGGCTTCAACGTGACGCTCGCCGACAATCTCGACTTCAAGGCCATGACCCGCACCATCGCGGAGTTCGAAGCGAAGATCGCTCCCGGCGACGAGGTCGTGTTCGAGTTCTCCGGCCACGGCGTCGCCATCGACGGGCGCAACTACCTCCTGCCCGTCGACGTCGAGCAGCCGCAGGCCGGCGGCGAGGCCGAGATCAAGAGCTTCGGGCGCGATGCCGGCCAGCTCGTCGATGATCTCAGGGCCAAGGGGCCGAAGCTGGTCTTCGCCATCCTGGATGCCTGCCGCGACAATCCGTTCCAGAGCGCCAGCCGGTCGATCGGCTCCTCGCGCGGCCTGGCGCGGATGGACCCGGACCCCGGCGCCTTCATCCTGTTCTCCGCCGGCCCGGGCGAGGAGGCTCTGGACCGGCTGGGCACCGGCGACAAGGAGGCGACCTCGGTCTTCACCCGCGTCCTGCTCAAATATCTCGACATGCCCGGCATCACCCTGCAGAAGCTGGCCAAGCTGACCCAGGGCGAGGTGAGCCGGCTGGCGGGCACCGTCGGCCACACCCAGTTCCCCGACTATTTCGACCGCACTGTGGACGAGCCGAGCCTCTCGGTCGCGGTCTGCACCGCCAGCCCCGCCAACGCCTATGTCGGCACCTGGGGCAATACCGATCCGCAGTCCGGGGTCGATCGCACCATCGTCATCCGCCAGAGCTGCCAGTCCGGCCGCACGCTCTACACGTTCGAGGAGAGCTGGGCCTGCCGGCAGCAACAGCAGCCGTGCCACCTCGGCACGCGCCCGGCCCGGCTCATCGAGAAGACCGGCGAGCTCGTGGTCGACGGCGTGATGAAGGATACGATCACCACGTTCAAGCTGAAGCTCTCCGGCCCGGACGCCATGAAGGTCGACATCGTCTCCGTGTTCACCGACGACAGCGGCCGCGACCCGCGCAAGGCCTCCCACGACTATGTCCGCCGGCCGGAAGGAGCCGTGGCCACCGCCGGGCCGGCTCCGGCTCCGGCCCCGCCGACGCCCAGCGTAGCCGCCGCTCCCGTCTCCGCGCCGCCGGTGCCGAGCGTCCCCGCCGCTCCCGTTTCCGCGCCGCAGCCTGCGCCGACGCCGCGCCTGGCCGACGCCGTGCAGACCCCGGCCGCCCAGGTCGCGACAGCGGTCGCGCCGGTCGTCGGATGCGACCGCTCGCATCTGGCGGGCCTGTGGCGCAATGCCGACCCGCATGCCCGCTCGATCGTGCGCCTCCTGATCACCAGCCAATGCGACGGCGGCCGGCCGAGCTACAGCGTCGAGGCCTGGGGCGCCTGCCGTCCCGTCGCCTGCGACTGGGGCATGGCGCCGGGGGTCTACGACGTGCCGAGCGGCCAGCTCAACATTCGCCACGTCTCGCCTTTCGCCGTCAGCACGCTCAACCTGCGTCCGGCCGGCGGCGACGCGCTCGACCTCACCCGGTCCACGGTGTTCGTCGACAGGAGCGGCCGCTCGCCCTTCTCCAGCGACGACGTGCTGGTCCGGGCGGCGAACTGA
PROTEIN sequence
Length: 568
MLQHLKLGFGVLVLLCALASPASAARLALVIGNDDYVSVTRLERAVADSQALRTALEKLGFNVTLADNLDFKAMTRTIAEFEAKIAPGDEVVFEFSGHGVAIDGRNYLLPVDVEQPQAGGEAEIKSFGRDAGQLVDDLRAKGPKLVFAILDACRDNPFQSASRSIGSSRGLARMDPDPGAFILFSAGPGEEALDRLGTGDKEATSVFTRVLLKYLDMPGITLQKLAKLTQGEVSRLAGTVGHTQFPDYFDRTVDEPSLSVAVCTASPANAYVGTWGNTDPQSGVDRTIVIRQSCQSGRTLYTFEESWACRQQQQPCHLGTRPARLIEKTGELVVDGVMKDTITTFKLKLSGPDAMKVDIVSVFTDDSGRDPRKASHDYVRRPEGAVATAGPAPAPAPPTPSVAAAPVSAPPVPSVPAAPVSAPQPAPTPRLADAVQTPAAQVATAVAPVVGCDRSHLAGLWRNADPHARSIVRLLITSQCDGGRPSYSVEAWGACRPVACDWGMAPGVYDVPSGQLNIRHVSPFAVSTLNLRPAGGDALDLTRSTVFVDRSGRSPFSSDDVLVRAAN*