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berkeley_reactor_200306_biofilm_scaffold_83611_10

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(9613..10479)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HV25_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 253.0
  • Bit_score: 374
  • Evalue 5.50e-101
HTH-type transcriptional regulator kipR Kip operon repressor protein similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 258.0
  • Bit_score: 389
  • Evalue 6.10e-106
HTH-type transcriptional regulator kipR Kip operon repressor protein {ECO:0000313|EMBL:CDM61332.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 258.0
  • Bit_score: 389
  • Evalue 3.00e-105

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGCCTCCTCGGACACCCCCTCTCGATGCCCTTCCCGAGAGCAGGCAGCCCAAGCGCGGCTCGGAGACGGAGTCCGCGACCGGCACCCAGGCTCTCGATCGAGGCGTGGCGATCCTGAAGCACCTGGGCGGCGTCGGCCAGCAGGGCGCGACCATCGCCGCGATCGGCGAGGCGCTCGGCCTCAAGCAGCAGACCGCGCATCGCATCGTGACAGCCTTGCAACGACACGGCCTGATCGATCGCGAACGCCAGACGAAGCGCTATCGCCTGGGCCTGGCGCTCTTCGCGATGGGCGCCACGGCGGCCGACGGCACCGGCTTGCGCCGCCTGGCCCGTCCGGCGCTGATGCGGCTTTCCGCCGAGACAGGCGACACCGTGTTCCTGATGGCGCGCGCCGGATTCAACACGGTGTGCGTCGACCGCCAGCAGGGCACCTATGTCATCGATAGCCTGACCGGTCATGTCGGCGGCCAGATTCCCATGGGCGTCGGTCCCGCCAGCCAGGCCATCCTGGCTTTCCTGCCTTCGGCCGAGGCCGACGTCGTCATCGAGACCAACGCCCCCCTCTATCAGCGCTACGACGGGCTTACGGCCGACCGCGTGCGCCAGTCCCTTCCGATCATTCGCGAGCGGGGCTACAGCGTGGACGAGGGCGCATTGGTCGCGGGGATTTCCGCCCTGGCGGTTCCGATCCTGCCTCGCGGCCGCGATGCCGTGGCCGCCATCGCCATCAACATGACCAGCGCCCGTCTCAGCCAGGACCGGCTTCCCGTCCTCGTGTCCACGCTGACGAACGAGGTCCGGCAGATCGAGGCCGAGCTGAACCCGCTGGAGGGGCCGGCGATCGTCGATCTGCTCAGGGCCTGA
PROTEIN sequence
Length: 289
MPPRTPPLDALPESRQPKRGSETESATGTQALDRGVAILKHLGGVGQQGATIAAIGEALGLKQQTAHRIVTALQRHGLIDRERQTKRYRLGLALFAMGATAADGTGLRRLARPALMRLSAETGDTVFLMARAGFNTVCVDRQQGTYVIDSLTGHVGGQIPMGVGPASQAILAFLPSAEADVVIETNAPLYQRYDGLTADRVRQSLPIIRERGYSVDEGALVAGISALAVPILPRGRDAVAAIAINMTSARLSQDRLPVLVSTLTNEVRQIEAELNPLEGPAIVDLLRA*