ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_83611_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13694..14887

Top 3 Functional Annotations

Value Algorithm Source
sarcosine oxidase, subunit beta (EC:1.5.3.1) similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 368.0
  • Bit_score: 517
  • Evalue 2.70e-144
Sarcosine oxidase, subunit beta {ECO:0000313|EMBL:CDM61328.1}; EC=1.5.3.1 {ECO:0000313|EMBL:CDM61328.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 368.0
  • Bit_score: 517
  • Evalue 1.30e-143
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Rhizobium sp. CF122 RepID=J2J6E1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 378.0
  • Bit_score: 496
  • Evalue 1.30e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACCGTCTTCGATGCGGCCATCATCGGCGGCGGCCTGGCCGGGTGCTCGGCGGCGCTGCATCTCAGCCTGCGTGGAGCCTCGGTCGTCCTGTTGGAGCGCGGGCTCTGCGGTGCCCAGGCCAGCGGCGTCAACTATGGCGGTGTTCGCCAGCAGGGGCGCCATCCCGCGGAATTGCCGCTGTCGCGGCGCAGCCGCGAGATCTGGGGACGGATGCCGGCGCTGATCGGCACGGACTGCGAATTCGCCATGACCGGCCACCTGAAGCTCGCCCTCACCGACCGGCAGATGACCGAACTCGTGACCTATCGGGATACGGCCGAGGCCTTCGGCCTCGCGCTCGAGCTGATCAGCCGCGATGCGCTCCAGCGTCGCTATCCCTATCTCGGCGGCGGCCTGGCCGGCGGATCGCTCTGCGCCGAGGACGGTCAGGCCAATCCGCGCCTCGTTGCGCCGGCCTTCGCCCGCGCTGCCCGCCGCGCCGGAGCCGATATCCGGGAGAACGCCGAAGTCAGCGGCGCCTGGCCCGACGGCGATGGCTTCGGCCTGCGTGTCGGCGGCGCGGCTGAGCCGGTTCGAGCGCTGAGGTTGATCAACGTCGCCGGCGCCTGGGGCGCGAAAGTCGCCTCCTGGTTCGGCGATGCGGTCGACGAAGGCGTGATCGCGCCGAACATGTGCGTCACCGAACCCCTGCCGGTGTTCATGGGACCCAATCTCGGCGTGTGCGGCGGCGGCATCTACCTGCGTCAGGTCCCGCACGGCAGCGTCATCTTCGGAGCCGGGCTCGGCGTGGCCGACCGCGACCGGTCCAGGGCCCGGCCTCTGGGCGAGGTGACGTGCGAGGCAGCCCGTTTGGCGATCGACATGGTGCCGAGGCTCGCCCAGGCGCTGCTGGTGCGAACCTGGACGGGCATCGAGGGCTGCATGCCCGACGGCCTGCCGGTGATGGGACCCAGCCCAAGCACGCCGGGGCTCTTTCACGCCTTCGGCTTTTCCGGACATGGCTTTCAGCTGGGTCCCGGCGTCGGAGCCGTTCTGGCCGAGTTGGCTCTGGACGGGACGACGCCGACGCCGATCGACGGGCTCTCGATCTCCCGATTCCATCCGGCACGCAGCGATCAGGGAAGAAGCCCGATGGCTCGAAGCGGTCCGGACGGTGGCATGCAAGACCGACAAGACAACCAGGGGAACTGA
PROTEIN sequence
Length: 398
MTVFDAAIIGGGLAGCSAALHLSLRGASVVLLERGLCGAQASGVNYGGVRQQGRHPAELPLSRRSREIWGRMPALIGTDCEFAMTGHLKLALTDRQMTELVTYRDTAEAFGLALELISRDALQRRYPYLGGGLAGGSLCAEDGQANPRLVAPAFARAARRAGADIRENAEVSGAWPDGDGFGLRVGGAAEPVRALRLINVAGAWGAKVASWFGDAVDEGVIAPNMCVTEPLPVFMGPNLGVCGGGIYLRQVPHGSVIFGAGLGVADRDRSRARPLGEVTCEAARLAIDMVPRLAQALLVRTWTGIEGCMPDGLPVMGPSPSTPGLFHAFGFSGHGFQLGPGVGAVLAELALDGTTPTPIDGLSISRFHPARSDQGRSPMARSGPDGGMQDRQDNQGN*