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berkeley_reactor_200306_biofilm_scaffold_83611_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 14889..15773

Top 3 Functional Annotations

Value Algorithm Source
polar amino acid transport system substrate-binding protein (EC:4.2.1.51) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 286.0
  • Bit_score: 441
  • Evalue 1.80e-121
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF122 RepID=J3BSC6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 281.0
  • Bit_score: 441
  • Evalue 4.80e-121
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL56604.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 281.0
  • Bit_score: 441
  • Evalue 6.80e-121

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGACGATCTTCAGCGAGCTGAAACATACGGTCGCGGCCGCAACGGTCCTCGGCCTCCTGACCGGAGGGGCTCCGGCGGTCGCCGACGACGCCTACAGGCTGGTCGAGCCCGGCGTTCTGACGGTGGCCATCACCGGCGACATGCCGGGCCTGGTGGCGCGTGACGGCAAGCTGGTCGGCTATGACGGCGACATCCTCCAGATCGCCGCCGACAAGCTGGGTTTGAAGATCAAGCCCGTGCCGACGGAGTGGTCCGGCGCGATTGCGGCGGTGCAGGCCGGCCGCGTCGATCTCATCGGCGGCAATGTCGCCTGGACCGAACAGCGTGCGGCCGCCCTGTCGCTGACCGACCCGACCGGATACTTCCAGAACGGCATCACGCAGAAGGCCGGGTCGGATTGGCATACGCTGGCGAGCCTCGAGAACAGGAAGGTCGGCTCGATGACCGGCTTCTCCTTCCTGCCCGAGCTGCGCAAGATACCGGGGCTGGAGCTCAACCTCTACGACTCCACGGACGCCGCCCTGCGCGACTTGATGTCCGGCCGGATCGAAGCCATGGTCGGCGACCCACCCGTCATCGACTATGCGATCGTCCAGAATCCGTCCTGGGGGCTGCGGAACACTCCGTTCACCGACAACAATCAGGACTTTCCGCTCCTGACCGGCATCGGGCGGCAATATGTCTTCGGCGTGAGCAAGGACAACAAGGCCCTTGCCGACGCGCTCAGCGCCGAGATCCGCAAATTGTGGGACACCTGCCAGGTGAAGGAGATCGGCAGACGCTACGGCAACATCAACAAGGCCAATTACACCCCTTCGCCGGACAACTTCCGGGTCGGCGTGGATCGGCCGCAGGGCTGGGCGCCCCCCGCATGTCCGCAGTGA
PROTEIN sequence
Length: 295
MTIFSELKHTVAAATVLGLLTGGAPAVADDAYRLVEPGVLTVAITGDMPGLVARDGKLVGYDGDILQIAADKLGLKIKPVPTEWSGAIAAVQAGRVDLIGGNVAWTEQRAAALSLTDPTGYFQNGITQKAGSDWHTLASLENRKVGSMTGFSFLPELRKIPGLELNLYDSTDAALRDLMSGRIEAMVGDPPVIDYAIVQNPSWGLRNTPFTDNNQDFPLLTGIGRQYVFGVSKDNKALADALSAEIRKLWDTCQVKEIGRRYGNINKANYTPSPDNFRVGVDRPQGWAPPACPQ*