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berkeley_reactor_200306_biofilm_scaffold_83611_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 16639..17286

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF122 RepID=J3BRD6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 212.0
  • Bit_score: 261
  • Evalue 5.00e-67
Inner membrane amino-acid ABC transporter permease protein yecS similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 215.0
  • Bit_score: 268
  • Evalue 8.90e-70
Inner membrane amino-acid ABC transporter permease protein yecS {ECO:0000313|EMBL:CDM61325.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 215.0
  • Bit_score: 268
  • Evalue 4.40e-69

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGACCCAGGCTCCCTTCTCCCGCATCGCCGAGGCGCTGCTGACCGGCGCATGCGTCACCCTGCAGGTTTCGGCGGGCGCGCTGGCGGTCGCCGTCTGTCTCGGGCTGCTGCTGGCTTCGCTCGGCGTTCTCCGCCCGGCACGATCGGTCCGGATCATCATCGCCGCCTATGTCGAGATCTTTCGCAACATCCCGAGCTTGACGCACCTGTTCCTCATCTATTTCGGGCTTGCCTATCTGGGGCTGCGGTTGACGTCGCTCACCGCTGCCGTCCTCGGCCTGGGATTGATCGGTGGCGCCGTTCTCGCCGACGTGTTTCGCGCCGGCCTGCAAGCCGTGCCGGCCGGGCAGTGGGAGGCTGCGCTGGCGATCGGCCTGTCCCCCTTCAAGGCCTTCCGCCTCGTCATTCTGCCTCAGGCCTGGCGGATCAGCCTGCCGCCGCTGGGCAACTATGCCATCGGCCTCGTCAAGGACACCTCGCTCGTCGCGGCGATCGCTGCGCCCGAGATCATGTTCAACGCCCGGCAGATCGTGAACGAGACCTTCGAGACGGCGCTGGTCTACGGCTCCGCGGCGCTGATCTATCTCGTCATCACCTTTGGTCTCAGCTGGCTTCTCGCCGTCGTCGAACGCAAGGCGGCCTATTGA
PROTEIN sequence
Length: 216
MTQAPFSRIAEALLTGACVTLQVSAGALAVAVCLGLLLASLGVLRPARSVRIIIAAYVEIFRNIPSLTHLFLIYFGLAYLGLRLTSLTAAVLGLGLIGGAVLADVFRAGLQAVPAGQWEAALAIGLSPFKAFRLVILPQAWRISLPPLGNYAIGLVKDTSLVAAIAAPEIMFNARQIVNETFETALVYGSAALIYLVITFGLSWLLAVVERKAAY*