ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_79982_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 641..1507

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 287.0
  • Bit_score: 451
  • Evalue 1.70e-124
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:ABE39282.1}; EC=1.1.1.31 {ECO:0000313|EMBL:ABE39282.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 287.0
  • Bit_score: 451
  • Evalue 8.40e-124
oxidoreductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000302DA5A similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 288.0
  • Bit_score: 469
  • Evalue 1.20e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAAGCTCGCTTTCCTGGGCCTGGGAGTCATGGGTTTCCCGATGGCCGGTCACCTCAAGGAACGGGGCGGCCATGACGTCACGGTCTACAACCGCACCATCGCCAGGGCCGAGGCCTGGGCGCGGCGTCATGGCGGCGCCATGGCGGCGACGCCGGCGGCCGCGGCGGCCGATGCGGACATCGTCTTCGCCTGCGTCGGCAACGACGACGACCTGCGCGCGGTGACCACGGGCGAAGGCGGCGCTTTCGCCGGCATGAAGCCGGGCGCGGTCTTCGTCGACCACACCACCGCCTCGGCCGAGGTTGCCCGCGAGCTCCATGCCAGGGCGCGGGAGATCGGCCTCGGCTTCGTCGACGCCCCGGTCTCGGGCGGCCAGTCCGGCGCCGAGAACGGCGTGCTCGGCGTGATGTGCGGCGGCGACGAGGACGTCTATGCCAAGGTCGAGCCGGTGATCGCCCACTATGCCCGCGCCTGCAAGCTGATGGGCCCGGTCGGGTCGGGGCAGCTGACCAAGATGGTCAACCAGATCTGCATCGCCGGCCTGGTGCAGGGCCTGGCCGAGGGCATCCATTTCGCCAGGAAGGCCGGCCTCGACCTCGAGCGGGTGATGAGCGTCATCTCCAAGGGGGCGGCCCAGTCCTGGCAGATGGAGAACCGCTGGAAGACCATGGACGAGGGCAAGTTCGATTTCGGCTTCGCCGTCGACTGGATGCGCAAGGATCTCGGCATCTGCCTGGCGGCGGCGCGCGACAGCGGGGCACGCCTGCCGGTCACGGCGCTGGTCGACCAGTTCTACGCCGAGGTGCAGGCCATGGGCGGCCGGCGCTGGGACACGTCCAGCCTTCTCGCCCGCCTGGACCGATAG
PROTEIN sequence
Length: 289
MKLAFLGLGVMGFPMAGHLKERGGHDVTVYNRTIARAEAWARRHGGAMAATPAAAAADADIVFACVGNDDDLRAVTTGEGGAFAGMKPGAVFVDHTTASAEVARELHARAREIGLGFVDAPVSGGQSGAENGVLGVMCGGDEDVYAKVEPVIAHYARACKLMGPVGSGQLTKMVNQICIAGLVQGLAEGIHFARKAGLDLERVMSVISKGAAQSWQMENRWKTMDEGKFDFGFAVDWMRKDLGICLAAARDSGARLPVTALVDQFYAEVQAMGGRRWDTSSLLARLDR*