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berkeley_reactor_200306_biofilm_scaffold_79982_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(4077..5000)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Rhizobium meliloti RepID=F6C0V5_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 316.0
  • Bit_score: 207
  • Evalue 1.20e-50
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 316.0
  • Bit_score: 207
  • Evalue 3.50e-51
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEG08932.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 316.0
  • Bit_score: 207
  • Evalue 1.70e-50

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAACATCGCACGCTACCGGCATGTCCTCGCCGTGGCCGACGCCGGAAGCTTCGGCCGGGCGGCCGCAGCGCTGGGCATGAGCCAGCCGCCGCTGTCGCAGTCGATCCGGCGCCTGGAACGCGACCTCGGCGTCACCCTGTTCGAGCGCACCACGCAGCACGTGGCGCTCACCCCGGCCGGAGAGGCCTTCCTGCCCGAGGCACGGGCCGCCGTCGCGGCGGCCGAGCGGGCCGCGGCGCTCGCCCGCGCCGTCGGCACCGCGCCGGCGCCGCTGCGCCTGGGGGTGGTCTCGGTCGCCTTGTTCGAGGTGCTGCCGGCGCTGCTGCAGGCGGCGGCGCAGGCCTCGATTCCGGTGCGCGCCGTCTATGCCTCGACCAACGACCAGCTCGCCGGCCTCGCCGACGGCAGCCTCGACATCGGCCTGGTCACGCCGCCCTTCGACGCGCCGGCCCGGCTGCAGGTGACGGTGGTCGCCGACGAGCCGGTCGTGGCGGCGATGCCGGTGGGATCAGCGGCGACGCCGGACGGCCCGGTGTCGCTGGAGGCCCTGGGCGAGCGCCTGATCCTGTTCCCGCGCCGGGACGGCCCGGCGCTGCACGACGCCATCCTGGCGCTGTTCCGCACCCGGGGACTCGCGCCCCGCACGATCGCCGAGGCGCCGGCCAGCATGCTGGCGACCCTCGCGCTCGTGGCGGCCGGCGTCGGCGCCTCCCTGGTGCCGGCCGCCGTGGCCCGCAACCTGACGATCGCCGGCGCCGCGTTCCGTCCGCTCGCCGCCGAGGGCGTGCCGACCTGGCCGGTCGCCCTGGCGCACATGCCGCTGGCGGCACGCAGCCCGGCAGCGCGCCTGCTCGGCGCCTGGCGCGGGGCGGGCACGGGAAGCGCACGCCCGGCAGGCGCAGGAAGCGCCCGCCGGGACTGA
PROTEIN sequence
Length: 308
MNIARYRHVLAVADAGSFGRAAAALGMSQPPLSQSIRRLERDLGVTLFERTTQHVALTPAGEAFLPEARAAVAAAERAAALARAVGTAPAPLRLGVVSVALFEVLPALLQAAAQASIPVRAVYASTNDQLAGLADGSLDIGLVTPPFDAPARLQVTVVADEPVVAAMPVGSAATPDGPVSLEALGERLILFPRRDGPALHDAILALFRTRGLAPRTIAEAPASMLATLALVAAGVGASLVPAAVARNLTIAGAAFRPLAAEGVPTWPVALAHMPLAARSPAARLLGAWRGAGTGSARPAGAGSARRD*