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berkeley_reactor_200306_biofilm_scaffold_79982_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 5112..5858

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CECA13 related cluster n=1 Tax=unknown RepID=UPI0003CECA13 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 248.0
  • Bit_score: 295
  • Evalue 2.80e-77
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX22218.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 247.0
  • Bit_score: 296
  • Evalue 3.00e-77
short-chain alcohol dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 248.0
  • Bit_score: 294
  • Evalue 1.70e-77

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGGACGGACTGCTCGCGGACCGCGTCGCCCTCGTCACCGGCGCTTCCTCCGGCATCGGCGCGGCGACGGCGCTGCGCCTCGCCGCTGCCGGGGCGCATGTCGTGCTCGCCGCCCGTCGCCTCGATCGGCTCGAGGCCCTGGCGGCTGGGATTGCCGGGCAGGGCGGCTCCGCCTCGGCCTTGCCGCTCGACGTCGCCCACGACGCCGATGTCGCCGCCGCGGCCGGGACGCTGCGCGACCGGCACGGCCGACTCGACATCCTGGTCAATGCCGCCGGGGTCATGCTGCTGTCGCCGGTGGCGGAGGCCGATCCGGCGGAGTGGCGGCGCATGGTCGAGATCAACCTGATCGGCCTGATGCAGGTGACCCGGGCGGTCCTGCCGCTCATGCCGTCCGGGCACGGCCATGTCGTCAACATCGCCTCGCTCGCCGGGCGCATCGCCAATCCCGGCGCATCCGGCTATGCCGCCACCAAGTTCGGCGTGGTGGCCTTCTCCGAATCGCTGCGGCGCGAGCTCGTCGGCCGGCGCATCCGCGTCACCGTGGTCGAGCCCGGCGTGGTGGTGACGGAGCTGCAGGAGCACGTCACCCATCCCGCGGCGCGGGCGACGCTGCTGGAGCGCATGGCGGCGGTCGAGTCCCTCGAAGCCGAGGACGTCGCCGCCGCGGTGTTCTACGCCGTCTCGCAGCCGCCGCGTGTCGGCGTCAACGAGATCCTGCTGCGGCCGGCGGGCCAAGAGCGTTGA
PROTEIN sequence
Length: 249
MDGLLADRVALVTGASSGIGAATALRLAAAGAHVVLAARRLDRLEALAAGIAGQGGSASALPLDVAHDADVAAAAGTLRDRHGRLDILVNAAGVMLLSPVAEADPAEWRRMVEINLIGLMQVTRAVLPLMPSGHGHVVNIASLAGRIANPGASGYAATKFGVVAFSESLRRELVGRRIRVTVVEPGVVVTELQEHVTHPAARATLLERMAAVESLEAEDVAAAVFYAVSQPPRVGVNEILLRPAGQER*