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berkeley_reactor_200306_biofilm_scaffold_79982_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 18162..18809

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036B2920 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 213.0
  • Bit_score: 271
  • Evalue 4.90e-70
Transcriptional regulator {ECO:0000313|EMBL:EJJ26750.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 215.0
  • Bit_score: 266
  • Evalue 2.20e-68
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 213.0
  • Bit_score: 265
  • Evalue 9.90e-69

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCGACAAAATCTGCAGAGCGAACGCCGGCCGCGCGGACGTCCGCAGATCCGATCCGACGAGGAGACGCGGCACCTGATCGTCGAGGCGGCAGCCCGGGCCTTCCAGGCCGACGGCTATGCCGGCACCTGCATGGGCGACGTGGCGCTGGCCGCCGGCGTCTCCACCAAGACGCTCTACCGCCTGATCCCGACCAAGGCGGAGCTGTTCATCGACGTGGTCACCGACCGCATCGGCCTGTTCATGCTGGCGATCGACCAGGAGGCGCTGGCCCCGCTCGGCCTGGAGACGGGGCTCGAGCGCATCCTCGTCGCCTATGGCCAGCTGACGCTCGACCCCGAGACCATCGCCATCAACCGGCTGGTGATCGGCGAGTCCGAGCGCTTCCCCGAGATCGGCAAGGCCTTCTACGAGCGCGCCATCATGCGCACCAGCGACGCCTTCGAGGCCTGGCTGCGCCGCCAGGCCGAGCGTGGCCTCCTGCGCCTGGAGGACCCGCACGCCGCCGTCGGCATGCTGCGCGGCATGATGATCATGGAGCCCCAGCGCGCCGCCATGCTCGGCCAGGCCCCGCCGCCCGACGCCGACGCCATCGCCCGGAGGGCGAAGCTGTGCGCCAGGCTGTTCCTGGACGGCTGCCGGGCGTGA
PROTEIN sequence
Length: 216
MRQNLQSERRPRGRPQIRSDEETRHLIVEAAARAFQADGYAGTCMGDVALAAGVSTKTLYRLIPTKAELFIDVVTDRIGLFMLAIDQEALAPLGLETGLERILVAYGQLTLDPETIAINRLVIGESERFPEIGKAFYERAIMRTSDAFEAWLRRQAERGLLRLEDPHAAVGMLRGMMIMEPQRAAMLGQAPPPDADAIARRAKLCARLFLDGCRA*