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berkeley_reactor_200306_biofilm_scaffold_79982_23

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 20737..21159

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4YX54_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 134.0
  • Bit_score: 143
  • Evalue 1.30e-31
Transcription elongation factor {ECO:0000313|EMBL:EIM28546.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.2
  • Coverage: 134.0
  • Bit_score: 143
  • Evalue 1.80e-31
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 140.0
  • Bit_score: 133
  • Evalue 3.80e-29

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGCCGACGAAACCAGCCGTCGCGGCGGCCGAGACCAGGCCGCGCATCACGCTTTCGGCCGAGGACCACGAGCGCCTGTCGGCGCTCGCCCAGGCTGCCGGCCACAAAGCGTCCGCGCTGGCGGCGGATCTCGCCGCGGAGCTGGAGAGGGCGCATGTGCTGGCGCGCGGCCGCGTGCCGGAGCACGCCGTGCGCATGGACAGCGAGGTCACCTTCCGCGACGAGGCCGCGAGCCGCAGCCGTACCGTGACCCTGGTCTATCCCGGAGAGGCCGATATCGCGCAGGGTCGCATTTCGATCCTGACGCCGGTCGGCACCGCCCTGGTCGGCGTGCGCGTCGGCGACACCATCGCCTGGACGGTGCCGAGCGGCGAGACACGGCGCTTCACCGTGCTGGCGGTGCGCGAGCGTCAGCCGGCGTGA
PROTEIN sequence
Length: 141
MPTKPAVAAAETRPRITLSAEDHERLSALAQAAGHKASALAADLAAELERAHVLARGRVPEHAVRMDSEVTFRDEAASRSRTVTLVYPGEADIAQGRISILTPVGTALVGVRVGDTIAWTVPSGETRRFTVLAVRERQPA*