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berkeley_reactor_200306_biofilm_scaffold_88389_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 1483..1860

Top 3 Functional Annotations

Value Algorithm Source
rnpA; ribonuclease P protein component (EC:3.1.26.5) similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 126.0
  • Bit_score: 112
  • Evalue 6.20e-23
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 124.0
  • Bit_score: 112
  • Evalue 3.10e-22
Ribonuclease P protein component n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YLD1_BRASO similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 126.0
  • Bit_score: 112
  • Evalue 2.20e-22

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Taxonomy

Bradyrhizobium sp. STM 3809 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCAGCGACTGCGCAAACGCCAGGATTTCCTTCGGGTCCGTGACGGCCGCAAGGCGAACGCCGCGACGCTGACCTTGCAGGCCCGTGCCCGGCCCGAGCCGGTCGGCGAGGCGGCGGCCGGCTTCACCGTCACCAAGAAGAATGGTGGCGCAGTGGAGCGTAACCGCATCCGCCGGCGTCTGCGCGAGGCCCTGCGGCGGATCGGCGCCCTTCACGGGCGCGAGGGCTATGACTATGTGGTGGTCGGGCGGCAGAGCGCCCTCGACGCGCCTTTCGCGACGATCCTGAACGACTTGACCACGGCGTTCGGCCGTGTGCACTCGGACCGCTCCGGCGGCCGCGGCGCGCGGCGACCGGCCGACGAGGCTGCACCATGA
PROTEIN sequence
Length: 126
MQRLRKRQDFLRVRDGRKANAATLTLQARARPEPVGEAAAGFTVTKKNGGAVERNRIRRRLREALRRIGALHGREGYDYVVVGRQSALDAPFATILNDLTTAFGRVHSDRSGGRGARRPADEAAP*