ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_88389_9

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 7005..8006

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XDP9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 281.0
  • Bit_score: 95
  • Evalue 9.70e-17
PKD repeat protein {ECO:0000313|EMBL:KHQ55156.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.9
  • Coverage: 244.0
  • Bit_score: 95
  • Evalue 1.00e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 153.0
  • Bit_score: 82
  • Evalue 1.80e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ponticoccus sp. UMTAT08 → Ponticoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGCCGGCCAAACTCGTCGCCATCCTTCTGTCCGTCGTGCCGGTCGTGATCGGCGTGCCCGCGCCGGCGAATGCGGCCGACGGCGCCGGCACGCTCGTCCGGGTCGCGCAAGCCGCGCCGGCGGCGGAGGACATTTTCTGGCAGACCATCCAGAACAGCACCGACCCGGCCATGTTCGAAGCCTATCTCGATCAGGTCCAGAAGGGCACGTTCCCCGGCACCTACAAGGCCCTGGCCGAAATCAAGATCAAATCCCTGCGCGCCGCCGCGCCGCCGCCACCCGCCCCCGAGACGGCTGCACCCCAGTCGCCCCCCGTCGAGCCGGCCGGGCCCCAGCCGGTGCAGCAGCCGTCGCGGGACGTTCCGGTGCAGCCGAAGGCCGCCTCCTCGGCCGATCTCGAAGCCTGCGATCGTGCGGCGGCCGATCCCAGGGACAAGCAGAAGCCCGACAATCTGCCCGGCGTCGAGTACAACAGCATCAACACCTTCGCGGCGATCGCCGCCTGCCGCAAGGTGGCGGAGACGTCGGATGCTCCGGCCCGCGTCTTCCATCAGCTGGCGCGCTCCTACGACAAGGCCGGCAACGTCAAGGACGCCGTCACCGCCTATGGCGAGGCGGTCAAGCGCGGCCACTCCAAGGCCGCCTACAATCTTGCCACGATCTTCGTCACCGGCCCGGGCGGCATGAAGAAGGACTACGGCATGGCCTTCACCCTGTACGAGCAGTCCAAGGCCGAGGTCCCGAATTCCCTGACCGGCCTGGGCTTGCTCTACCAGTTCGGCCGCGGCATCCGGCGCGACCTCAAGACGGCCATGGACTATTACCAACAGGCCATCGATGCCGGCGATCCCAACGGCTATGCCAAGCTCGGCAACATGACCTATGACGGCATCGGCATGCGGCGAAACCGCGACAAGGCCTGCAGCCTCTGGCAGGAGGGCGCGACGCGTGGCGATCCCGACTCCGGCGGGCAGCTGAAGCGGTTCTGCAAGGTCCGCTGA
PROTEIN sequence
Length: 334
MPAKLVAILLSVVPVVIGVPAPANAADGAGTLVRVAQAAPAAEDIFWQTIQNSTDPAMFEAYLDQVQKGTFPGTYKALAEIKIKSLRAAAPPPPAPETAAPQSPPVEPAGPQPVQQPSRDVPVQPKAASSADLEACDRAAADPRDKQKPDNLPGVEYNSINTFAAIAACRKVAETSDAPARVFHQLARSYDKAGNVKDAVTAYGEAVKRGHSKAAYNLATIFVTGPGGMKKDYGMAFTLYEQSKAEVPNSLTGLGLLYQFGRGIRRDLKTAMDYYQQAIDAGDPNGYAKLGNMTYDGIGMRRNRDKACSLWQEGATRGDPDSGGQLKRFCKVR*