ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_95231_189

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(195007..195570)

Top 3 Functional Annotations

Value Algorithm Source
NAD(P)H nitroreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000379B3B1 similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 187.0
  • Bit_score: 235
  • Evalue 4.40e-59
nitroreductase similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 187.0
  • Bit_score: 234
  • Evalue 2.10e-59
Malonate-semialdehyde dehydrogenase (Acetylating)/methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ERF85193.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 187.0
  • Bit_score: 234
  • Evalue 8.00e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGCCCGACGCCATCGACCTCCTGAAGATCCGCCGCTCCGTGCCGCCTGCCTTCCTCGCCGAGCCGGGGCCGGACGCCGCCCAGCTCGAGACGCTGCTCACCATCGCCGCGCGCGTGCCGGATCACGGCAAGCTGCATCCCTGGCGCTTCATCGTCTATGCCGGCGAAGCCAAGGCCAAGGCGGGGCGCATCATCGAGGAGGCCTTCCACGCCGGGAATCCGGATGCCGACACGGCGGCGCTGAAGAAGGAGGCGACCCGCTTTGCCGCCCCGCTGATCATCGGCGTGGTCTCCACCGCTGCTCCGCATGTGAAGATCCCGGTCTGGGAGCAGGAGCTCTCTGCCGGCGCCGTCTGCGCGAACCTGGTCGTCGCCGCCACGGCGCTCGGCTTCGGCGCGAGCTGGCTGACCGGCTGGTTCGCCTATGACGCCGAGGTGCTGGCCCGGCTCGGGATCGAGCCGCACGAGCGGGTCGCCGGATTCGTCCATGTCGGCACGCCGACCGAGGTCGTCCCGGATCGTCCGCGGCCAGCGCTCGGGGAAATCGTCAGCCATTTCAGCTGA
PROTEIN sequence
Length: 188
MPDAIDLLKIRRSVPPAFLAEPGPDAAQLETLLTIAARVPDHGKLHPWRFIVYAGEAKAKAGRIIEEAFHAGNPDADTAALKKEATRFAAPLIIGVVSTAAPHVKIPVWEQELSAGAVCANLVVAATALGFGASWLTGWFAYDAEVLARLGIEPHERVAGFVHVGTPTEVVPDRPRPALGEIVSHFS*