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berkeley_reactor_200306_biofilm_scaffold_96262_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2816..3220)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 134.0
  • Bit_score: 207
  • Evalue 7.50e-51
Ribonuclease VapC n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PTF5_RHIE6 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 134.0
  • Bit_score: 207
  • Evalue 5.40e-51
plasmid stabilization protein similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 134.0
  • Bit_score: 207
  • Evalue 1.50e-51

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGTATCTGGCCGATACCAACATCGTTTCGGAGGCTCGGCGAGGCACGCCGGAAGCCTTGAGATGGCTGCGTTCGATAGATCCCCGCGCCGTCTATCTCAGCGTCGTCACGCTCGGCGAGATCATGCGCGGCATCACGCTGAGGCAGAAATCCGATCCGCGAGCCGCGTCGCATCTGACGCAATGGCTCGAAGCGCTGAGGCGCGACCATGCCGAACGCATCCTGCCGATCACCGACCGGATCGCCGTCGAATGGGGAAGGCTCACCGCCTTGCGTCCCCGCGGCGATGGGGATGGCCTGATCGCGGCCACAGCCGCCGTTCACGGGCTCATCCTCGTCACGCGCAATGTCAGGGATTTCGCCGATACGCCGATCTCGATCGTCGACCCCTGGAACCCGGCTTGA
PROTEIN sequence
Length: 135
MYLADTNIVSEARRGTPEALRWLRSIDPRAVYLSVVTLGEIMRGITLRQKSDPRAASHLTQWLEALRRDHAERILPITDRIAVEWGRLTALRPRGDGDGLIAATAAVHGLILVTRNVRDFADTPISIVDPWNPA*