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berkeley_reactor_200306_biofilm_scaffold_96262_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 11529..12629

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0L3_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 362.0
  • Bit_score: 305
  • Evalue 4.00e-80
Uncharacterized protein {ECO:0000313|EMBL:KGF70087.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 364.0
  • Bit_score: 473
  • Evalue 1.50e-130
spermidine/putrescine ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 361.0
  • Bit_score: 309
  • Evalue 1.00e-81

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Taxonomy

Hoeflea sp. BAL378 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGCCCGACTTGCCGAGCCCCATCATCGAAGCCTCCGCCATCGTCAAGGACTACGGCCCGTTCCGGGCGCTGCACGGCGTGTCGCTCGACGTGGGCACGGGCGAGTTCGTGGCGCTCGTCGGCCCGTCGGGCTGCGGCAAGACGACGTTGCTGAAGATCCTGGCGGGGTTCGAGGCGCCGAGCCGGGGCGGCCTGCGCATCCGCGGCGCCGACATGGCCGGCGTTCCCGCGGCGGCGCGGCCGACGCGCATGGTGTTCCAGCGCCTGGCCCTGTTCCCGCACAAGAGCGTGCGCGACAACATCGCCTTCCCGCTCAAGCTCGCCAAGGTCGCCCGCGCCGAGAGCGAGGCGCGGGTCGCCGGGATGCTGCGGCTGATGCATCTGGATCCCGCCTATCTCGACCGCTTCCCGGCGCAGCTTTCCGGCGGCGAGCAGCAGCGCGTCGCCCTCGCCCGCGCCCTGGTGTCCAAGCCCGCGGTGCTGCTGCTCGACGAGCCGATGAGCGCGCTCGACGCCAAGCTGAAGAAGTCGCTGCAGGGCGAGCTGAAGAACCTGCACCGCAACCTCGGCACCAGCTTCGTCCTGGTCACGCACGACCTGGAGGAGGCGATGATGCTGGCCGACCGCATCTGCGTGATGCGCGGCGGCCGCGTCGTCCAGGTCGGCACGCCGGGCGAGATCTACTACCGCCCGGTCGACGCCTTCGTCGCCGGCTTCATCGGCGACACCAACCTGTTCCCGGTCTCGACGGCGCGGCGGGCGGACGGCGGCGTCTCCTGCGCCTCGCCGGTCCTCGCCGCCGAGGCGACGCTCTCGCCCGGGCAGATGGCGGACGGTGCCGCGGCGGGCGGCGCGGTGCTCCTCGTGCGGCCGGAGGCGATGCGCTTCGTCGGCGCGGATGGCGCCCGCGCCTGCACGCTGGCCGGGACGGTGGAGGAATATTTCGTCAAGGGCGCGTCGATCCAGTACCGCATCCGCGTGCCCGGGCACGAGGCGGCGGTGGTGATGGAGCTCGCCGGCACGCCGAACCTGCCGGCCGCGGTCGGCGACGCCGTGCGGGTCGGCTTCGACCCCGCCGACGCCTTCCTGCTCGGGGCCTAG
PROTEIN sequence
Length: 367
MPDLPSPIIEASAIVKDYGPFRALHGVSLDVGTGEFVALVGPSGCGKTTLLKILAGFEAPSRGGLRIRGADMAGVPAAARPTRMVFQRLALFPHKSVRDNIAFPLKLAKVARAESEARVAGMLRLMHLDPAYLDRFPAQLSGGEQQRVALARALVSKPAVLLLDEPMSALDAKLKKSLQGELKNLHRNLGTSFVLVTHDLEEAMMLADRICVMRGGRVVQVGTPGEIYYRPVDAFVAGFIGDTNLFPVSTARRADGGVSCASPVLAAEATLSPGQMADGAAAGGAVLLVRPEAMRFVGADGARACTLAGTVEEYFVKGASIQYRIRVPGHEAAVVMELAGTPNLPAAVGDAVRVGFDPADAFLLGA*