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berkeley_reactor_200306_biofilm_scaffold_116353_3

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 2791..3465

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulatory protein y4xI n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URP1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 223.0
  • Bit_score: 355
  • Evalue 2.00e-95
Putative transcriptional regulatory protein y4xI {ECO:0000313|EMBL:ENN84380.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 223.0
  • Bit_score: 355
  • Evalue 2.90e-95
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 222.0
  • Bit_score: 286
  • Evalue 4.30e-75

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGCGGCTCTTGTTGGTGGAGGACGAGCCCGAAATGGCGATGGCCTTGCAATCGGCGTTGCGGCGGCACGATATTGTTGCCGATCACGCCGAAGGGCTGGCAACCGCATCCGAGATGATCGAGGCCGGCACCTATGATGTCATTGTTCTCGATCGCGGGCTTCCGGATGGCGACGGCCTATCGTTCATTCCGACTCTGAGGCGTCGCGACATCAAGATCCCCGTTCTTGTGCTGACTGCGCGCGGGCGCCTCGCCGAGCGGGTGGCGGGGCTGGATGGCGGGGCGGACGACTATCTGGCCAAGCCGTTCGCGTTCGCGGAGCTGCTGGCTCGACTGCGGGCGGTCATGCGGCGCCCGGAACAGCTGCGGCCCGTGGTGGTCCGGCTGGGGCGCCTTACGCTGGATCTCGACCATCGCGAGGCGCAGGTGGAGGGAATGCGCTTCGATTTGCCGAGGCGCGAGCTGCTTGTGCTGGAGGCGTTGATGCGGCGCGTGGGCCGCATGGTGACGCGCGAGGTCCTGATGGAGGCGGTCTTCGGGCTCGCGGACGAGGTTCAGTCGAACACGCTGGATTCTCACGTTTCCCGATTGCGCCGCAAGCTGGCCGACGCCGATGCCGATGTCGTCATCAACGGCATCCGCGGCGTCGGTTATGTGTTGATGGAGCGTCCATGA
PROTEIN sequence
Length: 225
VRLLLVEDEPEMAMALQSALRRHDIVADHAEGLATASEMIEAGTYDVIVLDRGLPDGDGLSFIPTLRRRDIKIPVLVLTARGRLAERVAGLDGGADDYLAKPFAFAELLARLRAVMRRPEQLRPVVVRLGRLTLDLDHREAQVEGMRFDLPRRELLVLEALMRRVGRMVTREVLMEAVFGLADEVQSNTLDSHVSRLRRKLADADADVVINGIRGVGYVLMERP*