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berkeley_reactor_200306_biofilm_scaffold_116353_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3462..4832

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 456.0
  • Bit_score: 629
  • Evalue 2.70e-177
Putative two-component sensor kinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TV92_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 456.0
  • Bit_score: 629
  • Evalue 1.90e-177
periplasmic sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 448.0
  • Bit_score: 377
  • Evalue 3.80e-102

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAAGGGAGATGAGGGCCGCTCCCTGAAATGGCAGCTGGTTCGGCATCTGGTCATCCTGCAGAGTCTCATCCTGCTTGCCGTGCTGGGCGGCCTGTTCCTCAAGGGTGACCTGTTCTCCTTCCGCTCCTCCGACCGGACCATCGAAGCCCTTCGGGGAGCGGTGGAGCGCGACCTGTCGGGCGCGCTGCGCCTGCGAGAGACGTCCGAGCTGAGAGCCTTGCGCGCGGCCGAGGCCGGCCTATGGTTTGTCATCCGCGACGAGAGGGGTAGCCGGATCGCCGAAGGGCCGGTTCCGCCGCCCTTCGCCCGCATCGCCGACATGCTGTCGGGGATCGGTCAAGCGCGTTTCGGCTCGACGGTCGACAGCGCGGCCATGGACAATCCGGAAGCGCGCATGCGTCAGGTGACGACGCCGGTCGGCGAGCTTCAGATCCTGACGGGAACCGAAAGCCGGGCTCCGTTCGGCATGGTGGCTCTGGGAGCCGTCCTCGTCTTCGTCAAGATCGGGATGCCGATCCTGCTGGTCATCGTCATCGGCATCGTCATCGCGACACCGCTCGTCGTCCGCGCAGCGGTCGCCGGGATCGCGAAAGCCGAGGAGCAGGCGGCCCTGATCGACATCGGCCAACGCGGCGTCAGGCTGGAAACCACCGGTACGCCTCCCGAAATCGCCGCGCTCATCAGGGCGGTCAATGAGGCGCTCCGCCGGCTGGACGAGGGATATGAGCGGCAGCAGCGCTTCCTGGCCGATGCCGCGCATGAGCTCAGAACGCCGATCGCGATCCTCGACACCCGCATCGCTTCGCTGCCGCCCATGCCGGAGCGGACGCGCCTCGTCGCCGATGTTGCCCGATTGATCGTGCTGACGGAGCAATTGCTCGATCTCGAACGCCTGCGACGCGAGGTGAGGGCCTCGGAGCCGGTGCCGATCCAACATATGGCCAAGCGTGTCGTCTGCGACATGGCGCCGCTCGCTTTCGCCTCCGGCTACGAGCTGGACCTCGCATCGGAGGGGGCCGATCCAATCGTCCGGGGCGATGAGGGAGCCTTGGAGCGGGCTCTGGCGAGCTTGATCCAGAACGCCATCGATCACGGTGGGGGGCGGGGCACAATCAGGGTCCGCGTCGCCGCTCCCGGCATGATGGAAGTCAGCGATGACGGCCCCGGTATTCCCCCCGCGGAGCGCGAGCGCATCTTCGAGCCGTTCCACCGGCTCCACTCGCGCTCGCGCGGCACCGGCTTGGGCCTGCATCTGGTCAAGCAGATTGTGGACCTGCACGGTGGTCGAGTTGTAGCGGGCAACAGCCCGGCGGGCGGTGCGCGCGTCACCATCTGGATCCCAGCCGCTGCCACTGGAGCCGGGAGTTAG
PROTEIN sequence
Length: 457
MKGDEGRSLKWQLVRHLVILQSLILLAVLGGLFLKGDLFSFRSSDRTIEALRGAVERDLSGALRLRETSELRALRAAEAGLWFVIRDERGSRIAEGPVPPPFARIADMLSGIGQARFGSTVDSAAMDNPEARMRQVTTPVGELQILTGTESRAPFGMVALGAVLVFVKIGMPILLVIVIGIVIATPLVVRAAVAGIAKAEEQAALIDIGQRGVRLETTGTPPEIAALIRAVNEALRRLDEGYERQQRFLADAAHELRTPIAILDTRIASLPPMPERTRLVADVARLIVLTEQLLDLERLRREVRASEPVPIQHMAKRVVCDMAPLAFASGYELDLASEGADPIVRGDEGALERALASLIQNAIDHGGGRGTIRVRVAAPGMMEVSDDGPGIPPAERERIFEPFHRLHSRSRGTGLGLHLVKQIVDLHGGRVVAGNSPAGGARVTIWIPAAATGAGS*