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berkeley_reactor_200306_biofilm_scaffold_116353_17

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15929..17212)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQF5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 424.0
  • Bit_score: 369
  • Evalue 2.60e-99
sugar ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 427.0
  • Bit_score: 362
  • Evalue 9.00e-98
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 424.0
  • Bit_score: 460
  • Evalue 2.10e-126

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Taxonomy

R_Curvibacter_63_18 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGAGCCTACGCCGCAAGGTGGCCAGCCTCCTGGCCGCCGCCGCTTCGACATGCTGTCTTGCCCTCGCCGGCGCCGCGCAGGCCGGAGAGCTGACCATGGTCGAAGTGTTGACCAGCCCGGCCAGAACGGAGCTGATCACCAGCCAGCTCGCCGAATTCGAGAAGGCCAATCCGGATATCAAGGTCAACCTGATTTCCCTGCCCTACGACTCGTCGTTCGAAAAGCTTCTGACGATGTACAAGTCGGGCCAGGCGCCGGACGTCGTGGAGCTCGCCGACCGTTGGGGCGGCCTCTACGTGAAAGGCCACCAGCTGGAGCCGCTGGACCGCTACATCGCGAAGACGCCGGAGCTCGCCTCCATCCTTCCCAGCGTCATCGAGCTCGGCAAGGTCGGCACGAAGAGCGTCTATCGGCTGCCCTACGGCTTCGACATCAGGGCTCTCTATTACAGCAAGGATATGCTGCAGCAGGCCGGCGTCGAGCCGCCGAGGACCATGGACGACTTCTTCAAGGCCGCGGCCATCGTGACCGAAAAGCTGCCGGGCAAGTATGGCTACTGCATGCGTGCCGGCAAGGGCGGCGGCTATGGCTGGGGATCGTTCCCCATGCAGTTCGGCGCGACCGGATCCTTCTTCGACGCCGACGGCAACAGCCTGTATGCCTTCCCCGCCTTCCAGGAAGGCATGCAGAAATATGCCGACCTGTATAGGAAGGGTTATTCGCCCAGGGAAAGCATCGCCTGGGGTTTTGGCGACTCCGTCGCCGGCTTCACCAGCGGCCAATGCGCGCTTCTCGATCAGGATCCCGATGCGCTCCCGGACATCCTGAAGAAGATGGACCCGTCGAAGTTCGGTGTCGTGCCGATTCCGACCGGCGCGACGGGCAAGGCCTTTCCTTCGATGGGCTATTTCTCGTGGGCGATGTCGGCGGCCTCCAGGAACAAGGACGAAGCCTGGAAGCTGATCGCCTTCCTGATGGCGGACAAGCAGAACCTCGCGCTGGACAAATACCTGTTCATGGCGCCGGTCCATGTCGGCGCCGAGAAGGATCCGTTCTATGCGGCCGACGTGTGGAAGGCTTTCCTCACCACGCTGCAGCAGCCCCAGACCTATCAGACCTGGACGCAGCCGGCCTATCTGCCCGAATGGGGCACGCTCTATGACAAGACCATGATGGAGGACGGCCAGGCCATCCTGCTCGGCCAGAAGGACGTCAAGGAAACGGCAGAAAAATGGGCCGCCGTCCTGACCGCCGCCCAGAAGCGCTATCTCGCCGATCGATGA
PROTEIN sequence
Length: 428
MSLRRKVASLLAAAASTCCLALAGAAQAGELTMVEVLTSPARTELITSQLAEFEKANPDIKVNLISLPYDSSFEKLLTMYKSGQAPDVVELADRWGGLYVKGHQLEPLDRYIAKTPELASILPSVIELGKVGTKSVYRLPYGFDIRALYYSKDMLQQAGVEPPRTMDDFFKAAAIVTEKLPGKYGYCMRAGKGGGYGWGSFPMQFGATGSFFDADGNSLYAFPAFQEGMQKYADLYRKGYSPRESIAWGFGDSVAGFTSGQCALLDQDPDALPDILKKMDPSKFGVVPIPTGATGKAFPSMGYFSWAMSAASRNKDEAWKLIAFLMADKQNLALDKYLFMAPVHVGAEKDPFYAADVWKAFLTTLQQPQTYQTWTQPAYLPEWGTLYDKTMMEDGQAILLGQKDVKETAEKWAAVLTAAQKRYLADR*