ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_116353_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(17267..18442)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI0003059E09 similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 375.0
  • Bit_score: 382
  • Evalue 2.70e-103
lacK; Lactose ABC transporter, ATP-binding protein LacK similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 392.0
  • Bit_score: 378
  • Evalue 1.50e-102
Lactose ABC transporter, ATP-binding protein LacK {ECO:0000313|EMBL:CDN52319.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 392.0
  • Bit_score: 378
  • Evalue 7.20e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
GTGGCGGCGATAGAGCTCAGGCGCATCGAAAAGAGCTTCGGCGACACGCCCGTGCTCCGCGGCGTTTCTCTTGCGATTGAAGACGGCCAGTTCGTCGCCCTCCTCGGCGCATCGGGCTGCGGAAAATCGACGCTCCTGCGCATCATCGCAGGTCTTGAAAGGCAGGACGCGGGTGAAATCCATGTCGCGGGACGGCGGATCGACGATGTGAGAGCCGCCAAGCGCGACATCGCCATGGTGTTCCAATCCTATGCGCTGTATCCGCACATGACGGTGGCGCAGAATATCGCATCGCCGCTGCGCGTGAGAAAGCTGGATGTCTTTCAGCGGCTTCCGGTGCTGGGATCCTTGCTGCCTTCGACGAAGGGCAAGCTTCGGGAGATCCGGCGCGAAGTCCAGGACGTGGCGGCCTCGCTGAAGATCGGGCATCTCCTGGACCGTAGGCCGGACACTCTTTCGGGCGGGCAACGCCAGCGCGTGGCGATCGGCCGCGCGGTCGTCCGCCGCCCTCAGATCTTCCTGATGGACGAGCCGCTGTCCAATCTCGACTACAATCTTCGCGCGCAGATGCGAAACGAGCTCGTCGAGCTTCATCGTCGCCTGTCGGCAACCATCGTCTACATCACCCACGATCAGGCCGAGGCCATGACGATGGCCGACAAGATCGCCGTCATGCACGCCGGCGAGATCCTCCAGGTCGGCACGCCGGCCGACATTTACGCCAATCCCGCCTCTCGCGCGGTCGCCGAGTTTGTCGGGGCGCCGCGGATCAATCTGGTCGGGGGCGATCTGCGCGCCGAAGGCTTCGTTCAAAGCGGCAATCTGCGAATTCCGGTGACGGGACATGCGCCGCCCCAGCGCGTCACCGTCGCGGTAAGGCCCGAGGCGCTCGTCGTCGGTCCCTCCGGCGATCGCGGCTGGACCGGCACGATCCGCCGGATCGAGCATCTCGGCAGCGAGCTCATCCTTCACATCGCCCTGGATCGGCAAGGCGACGAGATCCTCGCAAGGCGCGATCCCCACGATACCGCGCAGCTGCAGGAGGGCTCTCCCGTTTCGGTCAATCCGCGAGCGGGCCATCCCGTCTTCTTCGACGAAAGCGGATTTCGGCTGTCCCTCCACATGCGCGAAGAGCCGTCCGGACCAGCCCGTCTGCTCATGACGTCTTCGGCATGA
PROTEIN sequence
Length: 392
VAAIELRRIEKSFGDTPVLRGVSLAIEDGQFVALLGASGCGKSTLLRIIAGLERQDAGEIHVAGRRIDDVRAAKRDIAMVFQSYALYPHMTVAQNIASPLRVRKLDVFQRLPVLGSLLPSTKGKLREIRREVQDVAASLKIGHLLDRRPDTLSGGQRQRVAIGRAVVRRPQIFLMDEPLSNLDYNLRAQMRNELVELHRRLSATIVYITHDQAEAMTMADKIAVMHAGEILQVGTPADIYANPASRAVAEFVGAPRINLVGGDLRAEGFVQSGNLRIPVTGHAPPQRVTVAVRPEALVVGPSGDRGWTGTIRRIEHLGSELILHIALDRQGDEILARRDPHDTAQLQEGSPVSVNPRAGHPVFFDESGFRLSLHMREEPSGPARLLMTSSA*