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berkeley_reactor_200306_biofilm_scaffold_116353_22

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 21350..23023

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C2BE6 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 556.0
  • Bit_score: 930
  • Evalue 6.50e-268
extracellular solute-binding protein family 5 similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 556.0
  • Bit_score: 927
  • Evalue 1.20e-267
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACS60494.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 556.0
  • Bit_score: 927
  • Evalue 5.90e-267

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
GTGACGACGAATCCGCATTCACATATTCCGACCTTGTTCGAAGAGTTCAGGACCGGCCAGGCCAGCCGCAGGCAATTCCTGCGCATGGCGACGTTGCTGGGCCTGTCCGCGGCGCTCGCCTATGAGGCGGTCGGGGAGATCGACCCCGTCGGCACGGCGCAGGCGGCGGACATGCCCAAGGGCGGCAACCTGCGCATCGGCATGCGCTGCATGGAGATCAAGAGCCCGCACCTGGCCGATTTCGCCGAGCGCTCCAACGTCATCCGCCAGGTGTGCGAGTATCTCACCTTCACCGGCCGCGACAACATCACCCGTCCCTATCTCCTGGAGAAGTGGGACGTCAGCGACGACCTCAAGACCTGGACGCTCCATATCCGCAAGGACGTCAAATGGCACAATGGCCGGCCGCTCACCGCCGATGACGTGGTCTGGAATCTGAGGCGCGTCAGCGATCCGGCGGTCGGCTCCTCGGTGCTCGGCCTGTTCACCGGCTATCTCGTGGAGGAATACCAGACCGGCGAGAAGGACAAGGACGGCAAGCCGAAGACGTCGAGCCGCCTGTGGTCGGACAAGGCGATCGAGAAGGTCGACGATCATACCGTGCGGCTGAATGCCTTCGCGCCGCAGATCGCTGTGCCCGAGCACCTGTTCCACTATCCCATGTTCATCATCGATCCCGCCGAGAACGGCGCGTTCGGGCCCGGCTCCAACGGCACCGGGCCGTTCGAGCTCGTCGAGTTCACGGTCGGCAAGAGCGCCAAGTACAAGGCCCGCAAGGACTATTGGGGATCCGCCCCCTACCTCGACACGTTCGAGTTCGTCGATCTCGGCGACAATCCGGGCGCTCAGATTGCTGCGATCGCGTCGCGCCAGGTCGACGGCCTGTCGGAAGCCGATGCCGTGCAGATCAACGCGATGAAGACCTTCCCGCATGTCGCGGTGCACAAGGTCGACACCACGCAGACCGCCGTCGCCCGCATGCACCCGGACCAGAAGCCCTTCAACGACAAGCGCGTGCGCCAGGCCATGCGCCTCGCCGTCGACCACGACAAGGTCATCCAGACCGTGCTGCTCGGCGCCGGCACCTCGGCCGAGGACCATCACGTCGCCCCGACGCATCCCGAATATGCGGCCCTGCCGAAATACGGCAAGGACGTGGACAAGGCCAAGACGTTGCTCGCCGATGCCGGCTATCCCGACGGCTTCGAGATCGACATGGTGACCCGGCCCGATCCGATCTGGGAGCTCAACACCGTTCAGGTCCTGGCGGAGCAGTTCAAGGACATCGGCGTCAGGATCAACATCAAGGCCCTGCCCAGCGCCCAATATTGGGATGTCTGGACCACGGTGCCCTTCAGCCTCACCGCCTGGGGCCACCGCCCCCTCGGCATCATGACGCTGTCGCTCGCCTACCGCTCGAACGCGGCGTGGAACGAGTCGGGCTATTCCAACCCCGAGTTTGACAAGCTGCTGAGCCAGGCCGAGGGCATCCTCGATCCGAAGCAGCGCAGCGCCGTCATGGCGAAGATCGAAGCGCTGATGCAGGATGACGGCCCGATCGTCCAGCCGTTCTGGCGGGTCTTCTCGACGGTGATGGACAAGAAGGTGATGGGCTTCCAGCTCCATCCCTCGCAGTACATCTTCGCCAACGAATACGCGGTGGCAGCCGCCTGA
PROTEIN sequence
Length: 558
VTTNPHSHIPTLFEEFRTGQASRRQFLRMATLLGLSAALAYEAVGEIDPVGTAQAADMPKGGNLRIGMRCMEIKSPHLADFAERSNVIRQVCEYLTFTGRDNITRPYLLEKWDVSDDLKTWTLHIRKDVKWHNGRPLTADDVVWNLRRVSDPAVGSSVLGLFTGYLVEEYQTGEKDKDGKPKTSSRLWSDKAIEKVDDHTVRLNAFAPQIAVPEHLFHYPMFIIDPAENGAFGPGSNGTGPFELVEFTVGKSAKYKARKDYWGSAPYLDTFEFVDLGDNPGAQIAAIASRQVDGLSEADAVQINAMKTFPHVAVHKVDTTQTAVARMHPDQKPFNDKRVRQAMRLAVDHDKVIQTVLLGAGTSAEDHHVAPTHPEYAALPKYGKDVDKAKTLLADAGYPDGFEIDMVTRPDPIWELNTVQVLAEQFKDIGVRINIKALPSAQYWDVWTTVPFSLTAWGHRPLGIMTLSLAYRSNAAWNESGYSNPEFDKLLSQAEGILDPKQRSAVMAKIEALMQDDGPIVQPFWRVFSTVMDKKVMGFQLHPSQYIFANEYAVAAA*