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berkeley_reactor_200306_biofilm_scaffold_116353_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 29320..30363

Top 3 Functional Annotations

Value Algorithm Source
Putative NAD-dependent epimerase/dehydratase n=1 Tax=Rhizobium loti RepID=M5ANU5_RHILI similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 341.0
  • Bit_score: 505
  • Evalue 4.20e-140
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDX44657.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 340.0
  • Bit_score: 518
  • Evalue 4.00e-144
NAD-dependent epimerase/dehydratase similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 342.0
  • Bit_score: 494
  • Evalue 2.10e-137

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
ATGACCCTCTTGGTGACCGGCGGCGGCGGCTTCGTCATGAGCGTCGTCGTGGGCGAATGGCTGGCGCGCGACCCCGCCAACAAGGCGGCGATCCTCGACCGAGGGCCGCTCGATGCCGCGGCCGAACGCTACTTCGCGCCGGTCCGCGAGCGCCTGACCGTCATCGAGGGTGATGTTTGCCGGGCGGAGACCTGGGCGAGCGCGCTCGACGGGCTCGACATCACGGCCGTGGTCCACGGCGCCACCGTCACGCCGATCTCGCGCGGCAGCGCCGCGGAAGCCAGGCGCCAGCCGGAGGCGGAAGATCCCGCCCGCATCGTCGAGGTCAACCTGATGGGCACCGTGCGCGTGCTGGAATGGGCGCGCGGCAATCCCGCCGTGCGGCGCTTCGTCTATGTCAGCTCAGGGTCCGTCTATCGCCATCACGGGCCGGACTGGCAGGGCGAGCCGTTGCCGGAGGACGGCTATGTCGCGCCGCTGACCCTCTACGGCATTGCCAAACATGCCTCCGAGATGGTGGTCAACCGCTATGCCGACCTCTTCGGTCTTCCGGCCGCCTCGGTGCGGCTGTCGTCGATCTATGGCCCGATGGACCGCGTCACCGCGAGCCGCAGCTTCCGCCATGTGCCGAACCGGGTCGCCCATTTGGCGCTGGCGGGCGAGGAGATCAGGCCGAACAGCCTGGACAGCGCCGGCGACTATCTGAGCTCGGTCGATGTCGCGGCTGCGATCCTCGGCCTGATCGAGGCGCCGGCCCTGCGCTATCGCCACTACAACGTCGCGAGCGGCGCCATCACCACCAGCGGCGATTTCATCCGCTGGGCCGCGGAAAAAGTGCCGGGCCTGCGCTGCCGGGTCACGCCCGATGCGAGCGCCAACATCGTGCAGGATCCGGCGCTGCGCGACGGCATGTGGGGGGCCTACGACACCGCCCGTATCGAGCGCGATACCGGCTGGCGCCCGCGGCCGCTGCGCGAGGCCTTCCACGCCTACATGGACTGGATCCTCGCCCATGAATCGGCCGCGGCCGACGGCCAGGCCTGA
PROTEIN sequence
Length: 348
MTLLVTGGGGFVMSVVVGEWLARDPANKAAILDRGPLDAAAERYFAPVRERLTVIEGDVCRAETWASALDGLDITAVVHGATVTPISRGSAAEARRQPEAEDPARIVEVNLMGTVRVLEWARGNPAVRRFVYVSSGSVYRHHGPDWQGEPLPEDGYVAPLTLYGIAKHASEMVVNRYADLFGLPAASVRLSSIYGPMDRVTASRSFRHVPNRVAHLALAGEEIRPNSLDSAGDYLSSVDVAAAILGLIEAPALRYRHYNVASGAITTSGDFIRWAAEKVPGLRCRVTPDASANIVQDPALRDGMWGAYDTARIERDTGWRPRPLREAFHAYMDWILAHESAAADGQA*