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berkeley_reactor_200306_biofilm_scaffold_112330_5

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(2392..3078)

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CUD0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 225.0
  • Bit_score: 357
  • Evalue 5.50e-96
Transcriptional regulator {ECO:0000313|EMBL:KGF66851.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 225.0
  • Bit_score: 359
  • Evalue 3.40e-96
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 225.0
  • Bit_score: 356
  • Evalue 4.50e-96

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Taxonomy

Hoeflea sp. BAL378 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGTCCGGCAGCCGCAAGATCCTGATCGTCGACGATGAAGGCGAATTGCGCTCGGCCCTGGCCGAGCAACTGGCGCTCTACGACGAATTCGAGATCGTCCAGGCGGAGTCGGCGACCAGGGCGGTGCAAGCCGCGAAGACAGATCATCTCGACCTCGTCATCATGGATGTCGGCATGCCAGACATGGACGGGCGCGAGGCAGTCCGGCTGATGCGCAAGAACGGCTTCAAGGCGCCGGTCATCATGCTGACCGGCCATGATTCCGATTCCGATACCATTCTCGGCCTGGAGGCCGGTGCCAACGACTATGTCACAAAGCCTTTCCGCTTCGCGGTGCTGCTGGCGCGCGTGCGTGCGCATCTGCGCCAGCACGAGACCAGCGAGGACGCCATTTTCACCGTCGGGCCCTTCACCTTCAAGCCGGCCTCCAAGCTGCTGCTGACCGACAAGGGTGCCAAGGTCCGGCTGACCGAGAAGGAGACCTCGATCCTGCGCTATCTCTACCGATCGGGCCAGAAGGCGGTGCCGCGCGAGGTGCTGCTGCAGGAAGTGTGGGGCTACAATTCCGGCGTGACCACCCACACGCTGGAGACGCATATCTACCGCTTGCGCCAGAAGATCGAGAAGGATCCGTCCAACGCCGCGCTCCTCGTCACCGAGGGTGGCGGCTACAAGCTGGTGCCCTAG
PROTEIN sequence
Length: 229
MSGSRKILIVDDEGELRSALAEQLALYDEFEIVQAESATRAVQAAKTDHLDLVIMDVGMPDMDGREAVRLMRKNGFKAPVIMLTGHDSDSDTILGLEAGANDYVTKPFRFAVLLARVRAHLRQHETSEDAIFTVGPFTFKPASKLLLTDKGAKVRLTEKETSILRYLYRSGQKAVPREVLLQEVWGYNSGVTTHTLETHIYRLRQKIEKDPSNAALLVTEGGGYKLVP*