ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

berkeley_reactor_200306_biofilm_scaffold_112330_8

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4623..7241

Top 3 Functional Annotations

Value Algorithm Source
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 873.0
  • Bit_score: 1381
  • Evalue 0.0
leuS; leucyl-tRNA synthetase (EC:6.1.1.4) similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 879.0
  • Bit_score: 1341
  • Evalue 0.0
Leucine--tRNA ligase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYZ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 873.0
  • Bit_score: 1378
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2619
ATGACCACCCAACGCTACAACGCGCGCGAGACCGAGCCCAGGTGGCAGAAGGCCTGGGCGGACAAGGCGATCTTCGAGACCCGCAACGACGACCCGCGCGCGCGCTACTACGTGCTGGAGATGTTCCCCTACCCCTCGGGGCGCATCCATATGGGCCATGTCCGCAACTACACCATGGGCGACGCCCTGGCCCGCTACAAGCGCGCCAAGGGATTCAACGTGCTGCACCCCATGGGCTGGGACGCCTTCGGCATGCCGGCCGAGAACGCGGCGATGCAGAACAAGTCGCATCCGGCGACCTGGACCTATGCCAACATCGCCACCATGAAGGCGCAGCTCAAGTCCATGGGCCTGTCGCTGGACTGGAGCCGCGAGATCGCGACCTGCGACCCGTCCTACTACAAGCACCAGCAGGCGATGTTCCTGGACTTCCTCGCCAACGGGCTGGTCGAGCGGAAGGTCTCCAAGGTCAACTGGGACCCGGAGGACCAGACCGTGCTCGCCAACGAGCAGGTGATCGACGGGCGCGGCTGGCGCTCGGGCGCGCTGGTGGAGCAGCGCGAGCTGACGCAATGGTTCCTGAAGATCACCGACTATTCGGAGGACCTGCTGTCGGCGCTCGACGGGCTCGACCGCTGGCCGGAGAAGGTCCGGCTGATGCAGAAGAACTGGATCGGCCGCTCCGAGGGCCTGCAGGTCCGCTTCGCCCTCGCGCCGCAGACCACGCCGCAGGGCGAGAACGAGCTCACGATCTACACCACGCGGCCCGACACGCTGTTCGGCGCCAAGTTCATGGCGATCGCCCCCGACCACCCCCTGGCCCAGGCCGCCGCAGCCAGGGATCCGGCGCTCGCCGCCTTCATCGAGGATTGCAAGCGCACCGGCACGGCGCTGGAGGCGATCGAGACCGCGGAGAAGAAGGGCTACGACACCGGCATCCGGGCGCTGCACCCGTTCGACCCGCATTGGGAACTGCCGGTCTATGTCGCCAACTTCATCCTGATGGACTACGGCACCGGCGCCATCTTCGGCTGCCCGGGCCACGACCAGCGCGACCTGGAATTCGCCGACAAATACGGCCTGGGCGTGGTGCCGGTGGTCTGTCCCGAGGGCGCCGATCCCGAAACCTACATGATCGACGAGATCGCCTATGACGGCGACGGGCGGATGATCAATTCGCGCTTCCTCGATGGGCTGACGGTGGCGCAGGCCAAGGAGGAGGTGGCGCGGCGGCTGGAGAGCGAAGTGCGCGGCAACATGCCGGTGGCCGAGCGCAAGGTCAATTTCCGCCTGCGCGACTGGGGCGTCTCGCGCCAGCGCTACTGGGGCTGCCCGATCCCGGTCATCCATTGCGAGACCTGCGGCGTCGTGCCGGTGCCCAAGAAGGACCTGCCGGTCAAGCTGCCGGAGGACGTCACCTTCGACAAGCCGGGCAACCCGCTCGACCGCCATCCGACCTGGCGGCACGTCGCCTGCCCGCAATGCGGACGGGAGGCCCGGCGCGAGACCGACACGATGGATACCTTCGTCGATTCGTCCTGGTACTTCGCCCGCTTCACCGATCCCTGGAACGAGACCGCGCCGACCACGCGCTCGGAAGTGGACCGCTGGCTGCCGGTCGACCAGTATATCGGCGGCATCGAGCATGCGATCCTGCACCTGCTCTACAGCCGCTTCTTCGTCCGGGCGATGCGCAAGACCGGCCATGCCGGGCTGGACGAGCCGTTCAAGGGGCTGTTCACCCAGGGCATGGTGGTGCACGAGACCTATCGCGACACGGAAGGGGCCTATGTGCTGCCCTCCGAGGTCAGGATCGGCGGCGAAGGCGAGGCGCGCCATGCCGTCAGCCTGAGCACGGGCGAGCCGATCCGGATCGGTCCGATCGAGAAGATGTCGAAGTCGAAGCGCAACGTCGTCGACCCCGACGACATCATCGCCGACTACGGCGCCGACACCGCCCGCTGGTTCATGCTGTCGGATTCCCCGCCCGACCGCGACGTGATCTGGACCGAGGAAGGCGTCCAGGGCGCCGGCCGCTTCGTGCAGCGCGTCTGGCGCCTGGTCAACGAGGTCGCGGCCAAGGCGCCGGCCTCGGCCCCGCCGGCCCGATATGGCGAGGAGGCGCTGGCGGTGCGCAAGGCGGCGCACCGGGCGCTGGCGGCGGTGGATGCCGACCTCGAGCGCCTGGCGTTCAACCGCTGCGTCGCCCATGTCTACACGCTGGCCAACGCGCTCGGCACGGCCGTGGCCGCCGAGGGCGCCCCGGCCGAGGGCATGCCGCAGGCGCTGCGCGAGGCGGCGACCATCCTGGTGCAGCTGATCGCGCCGATGAGGCCCCACCCCGCCGAGGAGTGCTGGAGCGCGCTCGGCGCCGCCGGCCTGGTGGCGGAGGCCGCCTGGCCGGCCGCCGATCCCGCCCTGCTGGAGGACGACACCGTCACCCTGCCGGTGCAGGTCAACGGGCGCAAGCGCGCGGACTTGACGGTGCCCAAGGCCGCGGCGCAAAACGAGATCGAGGCGGCGGTGCTGGCGCTCGACGCCGTGCAGCGCGCCCTGGAAGGCAAGCCGGTCAAGAAGATCATCGTCGTGCCCGGAAGGATCGTGAATGTCGTCGTCTGA
PROTEIN sequence
Length: 873
MTTQRYNARETEPRWQKAWADKAIFETRNDDPRARYYVLEMFPYPSGRIHMGHVRNYTMGDALARYKRAKGFNVLHPMGWDAFGMPAENAAMQNKSHPATWTYANIATMKAQLKSMGLSLDWSREIATCDPSYYKHQQAMFLDFLANGLVERKVSKVNWDPEDQTVLANEQVIDGRGWRSGALVEQRELTQWFLKITDYSEDLLSALDGLDRWPEKVRLMQKNWIGRSEGLQVRFALAPQTTPQGENELTIYTTRPDTLFGAKFMAIAPDHPLAQAAAARDPALAAFIEDCKRTGTALEAIETAEKKGYDTGIRALHPFDPHWELPVYVANFILMDYGTGAIFGCPGHDQRDLEFADKYGLGVVPVVCPEGADPETYMIDEIAYDGDGRMINSRFLDGLTVAQAKEEVARRLESEVRGNMPVAERKVNFRLRDWGVSRQRYWGCPIPVIHCETCGVVPVPKKDLPVKLPEDVTFDKPGNPLDRHPTWRHVACPQCGREARRETDTMDTFVDSSWYFARFTDPWNETAPTTRSEVDRWLPVDQYIGGIEHAILHLLYSRFFVRAMRKTGHAGLDEPFKGLFTQGMVVHETYRDTEGAYVLPSEVRIGGEGEARHAVSLSTGEPIRIGPIEKMSKSKRNVVDPDDIIADYGADTARWFMLSDSPPDRDVIWTEEGVQGAGRFVQRVWRLVNEVAAKAPASAPPARYGEEALAVRKAAHRALAAVDADLERLAFNRCVAHVYTLANALGTAVAAEGAPAEGMPQALREAATILVQLIAPMRPHPAEECWSALGAAGLVAEAAWPAADPALLEDDTVTLPVQVNGRKRADLTVPKAAAQNEIEAAVLALDAVQRALEGKPVKKIIVVPGRIVNVVV*