ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_112330_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(8871..9638)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8B9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 266.0
  • Bit_score: 217
  • Evalue 9.90e-54
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 266.0
  • Bit_score: 217
  • Evalue 1.40e-53
outer membrane lipoprotein carrier protein LolA similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 251.0
  • Bit_score: 203
  • Evalue 4.20e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGCCGTCTGTCAGGACTCTTGCCTTCGTCGCCGGACTGACCGCGCTCGCCGGGTCCGCTTTCGCGGGTTTCGCCCAGGCCCAGACCGACGCGGCGACGCCGTTGCCGCCCAGTCGACCGCCGGCGGCTGCGCAGGAGCAGGTCGCCGGGGCCGCGCCGGCCATCAAGCCGCCGCCGGCGATCGGCGCGGTGCCCATCGTGGCGCTCGGGCCGTTCGATCCCGGCGCCATCACCCCGGCGCAGGCGCAGGCCATCCGCGGCGTCAACGCCTATCTCAATTCCGTGCGCGTGATGAGCGGCTCCTTCACCCAGCTCGCGCCGGACGGCACCCGCAGCTCCGGTCAGTTCTGGGTGTCGAAGCCCGGCAAGCTGCGTTTCCAATATGCGCCCCCCTCGCCGCTGGAATTGATCGCCGACGGTCGTTCGGTGGCGGTGCGCAATCGCAAGGACAACACCCAGGACCTCTACTTCATCAGCCAGACGCCGCTGCGCTTCCTGCTGGCCGACAGCATCAATCTGATCCAGGACGCTTCGCTCATCGGCCTCTACGGCGACAAGGATTCGGTGACCGTGACGCTGGAGGAGAAGTCGTCCATCGGCGGCTCGGCGCGCCTCTCGCTGATGTTCTCGGCGAAGGACTATGCCCTGAAGCAGTGGACGATCACCGACGCGCAGGGCTACGACACCACCGTGTCGATCTACGACGTCGACACCAAGTCGCAGCCCAACAACAAGCTGTTCTACATCAACGAGCAGCGCACGCTCTGA
PROTEIN sequence
Length: 256
MPSVRTLAFVAGLTALAGSAFAGFAQAQTDAATPLPPSRPPAAAQEQVAGAAPAIKPPPAIGAVPIVALGPFDPGAITPAQAQAIRGVNAYLNSVRVMSGSFTQLAPDGTRSSGQFWVSKPGKLRFQYAPPSPLELIADGRSVAVRNRKDNTQDLYFISQTPLRFLLADSINLIQDASLIGLYGDKDSVTVTLEEKSSIGGSARLSLMFSAKDYALKQWTITDAQGYDTTVSIYDVDTKSQPNNKLFYINEQRTL*