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berkeley_reactor_200306_biofilm_scaffold_112583_2

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 316..924

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI00036CFCC1 similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 158.0
  • Bit_score: 169
  • Evalue 1.90e-39
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 195.0
  • Bit_score: 169
  • Evalue 9.00e-40
Uncharacterized protein {ECO:0000313|EMBL:GAK68885.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 166.0
  • Bit_score: 169
  • Evalue 3.40e-39

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAAGACCACGATTACGCGCTTCTACGACCGATATGCCGGCGCCCAGCGTGCGCTCGAGGATCTCATCGAGAACGGCGTCCCGCGCGCAGACATCTCCATCGTCGCCAACACGGCGGACGACGACTATCTCGCCCATGCCGGCAACTCGCAGACGGCCGAGGGTGCCGGCACCGGCGCCGGCATCGGCGGCGTCCTGGGCGGCGGCGCCGGGCTGCTCGCCGGTCTCGGCATGATCGCCGTTCCCGGGCTCGGCCAGGTGGTGGCGGCCGGCTGGCTGGCCTCGCTGGCCGCCGGCTTCGTCGCCGGCGCCGCAGCCGGCGCGGCGGCGGGCGGCGTCATCGGCGCCCTGATGGAGTCCGGCCTCAGCGAGGAGCGCGCCACCGTCTATGTCGAGGGCGTCGGCAAGGGCGGGGCGCTCCTGACCGTGCGGGTCGACGAAGCCTTTGCCGACGAGGTCAAGACCACGCTCGACGCCCATGGGCCGGTGCGGCCCGGCCCCGATCCGGACGAGGCGGTGCCCCATGCCGACGCCCGCTCCGCGCCGCAGCCGCGCTCCGTGGAGGAGCTGCGCGATCGCATGAGCATCGACCAGCCGCCGCTCGTCTGA
PROTEIN sequence
Length: 203
MKTTITRFYDRYAGAQRALEDLIENGVPRADISIVANTADDDYLAHAGNSQTAEGAGTGAGIGGVLGGGAGLLAGLGMIAVPGLGQVVAAGWLASLAAGFVAGAAAGAAAGGVIGALMESGLSEERATVYVEGVGKGGALLTVRVDEAFADEVKTTLDAHGPVRPGPDPDEAVPHADARSAPQPRSVEELRDRMSIDQPPLV*