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berkeley_reactor_200306_biofilm_scaffold_112583_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(12708..13724)

Top 3 Functional Annotations

Value Algorithm Source
Rranscriptional regulator, AraC family n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQD7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 30.6
  • Coverage: 327.0
  • Bit_score: 116
  • Evalue 3.10e-23
Rranscriptional regulator, AraC family {ECO:0000313|EMBL:EGP06551.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 327.0
  • Bit_score: 116
  • Evalue 4.40e-23
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 167.0
  • Bit_score: 102
  • Evalue 1.30e-19

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGGCGCATCTGGCCATCGATACGCATTTCGTCCCGGAAAAGGAACGCGCGACTTACTTGCAGGATGCCATGCAGGTGTCGCCGATGCCTTTGATCAACATCACCGAATCCCGCTTCGAGGACAGCGGCTTTCGGGTACGGTTTGCTGGGAAGATGCTGGGAGATGCTCTCATGACCCGGTTCGACGCCAGCTCACTGCATCTCAAGAGAACCTCAAAGGAGATCTCCAGACAATCGAGCGGGATATTGCTTCTCGCCCTGCTGCACCGGGGCTCCTACGATCAGACGTTTGAGTATCACGCTCCATTTCTGAAGACCGCTCCGGGAGATCTTCTGCTGGCCGATCTCGACGCCCCGCAAAGCGTGACCTTCACCAAGTCCGCCTGCGCGACCTGTGCCTATATCCCTCGGGACCGCTTTCAACCGCTGATCGGCAGCACGTCCCCGTTGAAGCCGATCCTGCTGCAGCCACGCGACCAGCTCCATGGGCTGCTCGCCGCCTGTTTCATGGCATGCGCGTCGATGCGCGATCCGACGCCGGCCGCCGCCGCGGCGGCGCTGGATACCCTGACCCGGCTGACCTTGATTGCGCACGGCCTGCATCTGTCGGATCACCAGGCCCTGCAACCGCCGCTGATCGAAGCGCGCCGACAGCAAGCCCGACAGTTCATCGCCGCTCGCTCGGACAATCCGCGCCTCGATCCGCAGATGATCGCCGACCATCTCGGCCTGTCGCTGCGATCGCTGAACCTGGCGTTCGAGCCGACCGGACAGGGGGTCGCGGCGCTGATCCAGGCCACCAGGCTGGCGCGGGCCAAGGACATGCTGCTGCGGCTTCCGGATCGCTCGACGCTCGACATTGCGTTGGCCTGCGGCTTCAACACTCTCGCCACCTTCTACCGGCGCTTCGTGCAGGAATACGGCGTCGCGCCGGGCGAATTTCGCAGGACGCGCGCCCGATCCACGGACGATCGGAGAATCGACCCTGCGGATAGTCGGAAAACGTCCGGGACTTAG
PROTEIN sequence
Length: 339
MAHLAIDTHFVPEKERATYLQDAMQVSPMPLINITESRFEDSGFRVRFAGKMLGDALMTRFDASSLHLKRTSKEISRQSSGILLLALLHRGSYDQTFEYHAPFLKTAPGDLLLADLDAPQSVTFTKSACATCAYIPRDRFQPLIGSTSPLKPILLQPRDQLHGLLAACFMACASMRDPTPAAAAAALDTLTRLTLIAHGLHLSDHQALQPPLIEARRQQARQFIAARSDNPRLDPQMIADHLGLSLRSLNLAFEPTGQGVAALIQATRLARAKDMLLRLPDRSTLDIALACGFNTLATFYRRFVQEYGVAPGEFRRTRARSTDDRRIDPADSRKTSGT*