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berkeley_reactor_200306_biofilm_scaffold_112583_16

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15341..16015)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000371454C similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 222.0
  • Bit_score: 277
  • Evalue 7.10e-72
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG08893.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 220.0
  • Bit_score: 240
  • Evalue 2.30e-60
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 220.0
  • Bit_score: 238
  • Evalue 1.80e-60

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Taxonomy

Pseudogulbenkiania ferrooxidans → Pseudogulbenkiania → Neisseriales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
GTGGACGACGGGAACCTGGGACTGAAGGTCGACCGCAGCGCCAAGACGCTGCGGGAGCTGGCGCTGGAGAAGCTGCGCGACGCGATCCTGGATTTCCGCTTCCAGCCCGGGGAGCGGCTGGTCGAGCGCACGCTGTGCGAGCGGCTCGGCGTCAGCCGCACGGTGGTGCGCGAGGTGCTGCGGCATCTCGAGGCGGAGGGGCTGGTCGAGACCATCCAGAACCAGGGTCCGGCGGTGACCCGGCCCGATCCCGCCAGCGCCGCGCAGGTCTACGAGATCCGCGCCCTGCTGGAGGCACAGGCGGCGGGTGCCTGCGCCGAGCGCGCCACGGCCGCGGACATCGCGCGCTTCTCCGCCGCGATCGACACGATCGAGGCCGCCTTCGCCGCCGGCGATTCGCGCGGCGTCATCAAGGCGACGACCGACTGCTACGAGGTGCTGTTCGGCATCGCCGGCAAGAGCGTCGCCTGGAGCGTGGTGCAGTCGCTCAACGCCCGCATCAATCATCTGCGGGCGATGACGATCTCGACGCCCGGCCGGGACAAGGCCGCCATTGCCGAGATGCGCCGCATCGCCGCGGCGATCGCGCGGCACGACGTCGACGGCGCCCGCCAGGCGAGCATCGCCCATGTCGAGGCGGTCGCCGCCCTGGCCCGGCAGTTCCTGTCGGCCTGA
PROTEIN sequence
Length: 225
VDDGNLGLKVDRSAKTLRELALEKLRDAILDFRFQPGERLVERTLCERLGVSRTVVREVLRHLEAEGLVETIQNQGPAVTRPDPASAAQVYEIRALLEAQAAGACAERATAADIARFSAAIDTIEAAFAAGDSRGVIKATTDCYEVLFGIAGKSVAWSVVQSLNARINHLRAMTISTPGRDKAAIAEMRRIAAAIARHDVDGARQASIAHVEAVAALARQFLSA*