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berkeley_reactor_200306_biofilm_scaffold_112583_28

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27161..28945

Top 3 Functional Annotations

Value Algorithm Source
Putative Rieske iron-sulfur protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AVZ2_PSERE similarity UNIREF
DB: UNIREF100
  • Identity: 41.1
  • Coverage: 372.0
  • Bit_score: 300
  • Evalue 2.10e-78
Uncharacterized protein {ECO:0000313|EMBL:KGM35479.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 360.0
  • Bit_score: 476
  • Evalue 3.90e-131
putative Rieske iron-sulfur protein similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 372.0
  • Bit_score: 300
  • Evalue 5.80e-79

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
ATGCTCGACCGTCCGGGAAAATCCGCCCGCATGCGCCGGCCGCAGGAAGAGCGGCGCGAGCAGCTCCTGGAAGCGGCGATGGAGGCGATTGCCCGGCACGGCCTGTCGAACGTGACGCTGGAGAAGGTGGCCAAGCTCGCCGGCCTCACCGCCGGCATGGTCAATTTCCATTTCACCTCGAAGCAGGACCTCCTGGCCGCCACCATCGGGCGCCTGGCCGACGAGCATCGCGAGGCCTGCGAGGCGGCGGTGGCGCCCCACGCCGGCAAGCCGGTCGAGGCGATCATGGCGCTGCTCGCCGTGAATTTCGACAAGACCATCGCCACGCCGGTCAAGCTCGCGGTCTGGACCGCGTTCTGGGGCGAGAGTGGGGCGCGGGCCGACTATATGGCGGTCTGCGGCGCCTCGGACCGGGCCTACCAGGATGCGGTGCGGGCGCTGGTCGCAGATCTCGTCGCCACGGCGGGCGTCGCGGTCGATGCTAGGTCCGCTGCGCTGGGCCTCTGCGGCCTTGTCGACAATCTCTGGCAGGAAGCGCTGGTGGAGGGCGAGGCCTTCGACCATGCCGCCGGCCTCGAGCTCTGCCGGCTTTACCTGAAGAACCTGTTCCCCAGCCTGTTCGCCGCGGATCCGCCGCAGGACAAGGCGGCCGAGACCGAGGACCTGTCCGAGGAGGAGCGGGACTATCTCGCGCGCCTGACCCTGCCGGCCTGGACCTATCGCGACGCGGCCTTCTCGGCCGCCGAGGTCGAGCGCGTGCACCTGCCGGCCTGGCATGTGCTCTGCCATGTCGGCGAGCTGCCGACTCCGGGCGACTACGTCACCATGGAGGTGCTCGGCAAGCGCGTCCTCGCCATGCGCGGCGAGGACGGCGCGGTGCGCGTCTTCCACAATGTCTGCCGCCATCGCGCCCACGCCATCGCGCCGCACCGGCAGGGACACACCGACACCGTCCTGCAATGCCCCTACCATGCCTGGTGCTACGACACGCAGGGCGTGCTGAGAGGGATCGCCGCCTCGCGCACCTTCCCGAAGCTGGACAAGGCCAATCTCGGCCTGTTCCCGGTGGACTCGGAGATCTTCTGCGGCTTCGTCTTCGTCCGCTTCGCGCCCGGCGGCGCCTCGGTGGCAGAGCGCTATGCGCCCTATGCCGAGGAGCTCGCGCCTTACGCCATCGCGGACATGGTGCCGATCTCCGACTATTGGCAGGGCACGGTCGAGGCCGACTGGAAGAATGTCTGGGACAATTACCTCGAGGACTACCACTTTCCCGTCGGCCATCCCGGCCTCAGCGCGCTGATGGCCAAGGACTATGACCGCGAGCCGGACCACGCCACCCGCACCATCCGCCTCAGCCACGTGATGCGCGAGGAGGTGCGGGGCGACTGGTCGACGCGGATGTATGCGCGGCTCCTGCTGGCGAGCGAGCACCTGCCGCCGGCGCAGCGGCGGCGTTGGAGCTATTTCTACATGTATCCCGGCGTCGCCATCGAGACCTTCCCCGACCAGGTCGACTTCTACCACATCACCCCGCTCGGCCCCGGACGTTCGCGGATCCGCTGGCGCAGCTACGGCCCGAGGCAGGCGGACCGGCAGCTCGAGGCGGTGCAATATCTCGGGCAGCGCATCAATTTCGGGGTGCACCACGAGGACAATGCGCTGATCGAATCCGTGCAGGAGAACCTCAACGCCGGGACCTATGAGCGCGGCGTGCTGTCGGACAAGGAAGTCAATGTCCGGGCCTTGCACGACTGGGTGCGCCAGGACATGCCGCAGGCGCGGTGA
PROTEIN sequence
Length: 595
MLDRPGKSARMRRPQEERREQLLEAAMEAIARHGLSNVTLEKVAKLAGLTAGMVNFHFTSKQDLLAATIGRLADEHREACEAAVAPHAGKPVEAIMALLAVNFDKTIATPVKLAVWTAFWGESGARADYMAVCGASDRAYQDAVRALVADLVATAGVAVDARSAALGLCGLVDNLWQEALVEGEAFDHAAGLELCRLYLKNLFPSLFAADPPQDKAAETEDLSEEERDYLARLTLPAWTYRDAAFSAAEVERVHLPAWHVLCHVGELPTPGDYVTMEVLGKRVLAMRGEDGAVRVFHNVCRHRAHAIAPHRQGHTDTVLQCPYHAWCYDTQGVLRGIAASRTFPKLDKANLGLFPVDSEIFCGFVFVRFAPGGASVAERYAPYAEELAPYAIADMVPISDYWQGTVEADWKNVWDNYLEDYHFPVGHPGLSALMAKDYDREPDHATRTIRLSHVMREEVRGDWSTRMYARLLLASEHLPPAQRRRWSYFYMYPGVAIETFPDQVDFYHITPLGPGRSRIRWRSYGPRQADRQLEAVQYLGQRINFGVHHEDNALIESVQENLNAGTYERGVLSDKEVNVRALHDWVRQDMPQAR*