ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_132831_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10550..10960)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator with C-terminal CBS domain-containing protein n=1 Tax=Rhizobium sp. CF122 RepID=J3BRD8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 118.0
  • Bit_score: 149
  • Evalue 1.30e-33
Putative transcriptional regulator with C-terminal CBS domain-containing protein {ECO:0000313|EMBL:EJL56611.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 118.0
  • Bit_score: 149
  • Evalue 1.90e-33
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 124.0
  • Bit_score: 142
  • Evalue 8.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGAGGGAGATGGCGCGGACGCTCGACGAAGTCATTGGGTCGCTCTCACCCGAGCAGCAGGCCCGTGTGTCTGCGCGCCATCAGCAGCTCCGCCAGGAGGTCGAAGGCTTGCGCGAGCTCCGTCGCGTTGCCGGCAAGGCGCAGTCCGAGTTGGCCGCAGCTCTCCGTATCAAGCAACCATCGGTCTCCAAGATCGAGCGACAGGCCGACCTGTACCTCTCGACGCTGCGAACCTATGTGGAGGCGCTCGGCGGGCGGCTGGAGCTCGTGGTCCATTTGCCGGATCGCCCCACGCTGCGGCTGACGACGATCGGCGACCTTGTCGGGGGACAAGATCCCGCTCCGAAGCCCGCTCCGGCGCGCAGGAAGCCCGCCGTGCGCGGTCAGCATTCGCCGTTGATCGAGAGGTAG
PROTEIN sequence
Length: 137
MREMARTLDEVIGSLSPEQQARVSARHQQLRQEVEGLRELRRVAGKAQSELAAALRIKQPSVSKIERQADLYLSTLRTYVEALGGRLELVVHLPDRPTLRLTTIGDLVGGQDPAPKPAPARRKPAVRGQHSPLIER*