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berkeley_reactor_200306_biofilm_scaffold_132831_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(11311..12108)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-bound lytic murein transglycosylase B n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKZ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 266.0
  • Bit_score: 389
  • Evalue 2.00e-105
Membrane-bound lytic murein transglycosylase B {ECO:0000313|EMBL:EIM24636.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 266.0
  • Bit_score: 389
  • Evalue 2.80e-105
membrane-bound lytic murein transglycosylase protein similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 258.0
  • Bit_score: 384
  • Evalue 1.80e-104

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGTCGACGGGCGGGCACTACGGAGCGATCGGCTTTGCAGCCTGGCTGGCACTCATGGCCATGGCCGGCACGGCCGCCGCCGCGCAATGCGGCAACTCGGCGGCAGGCTTCGAAGCCTGGAAGAAGGAGTTTGCCGGCGAGGCGTCGGCCCGGGGCACCGGGTCGCGCGCCATCTCGGCCCTGATGGCGGCCAGCTATTCGACCGCGACGATCTCGGCCGACCGCGGCCAGAAAAGCTTCCGCCTGTCGCTCGACCAGTTCATGGCCAAGCGCGGCGGCTCGGTCATCGCCAGCCGCGGCAAGGCGCTGAAGCGCTCCAACGCCGCCCTGTTCGCCTCGATCGAGCAGCGCTACGGCGTCCCGCCCGGTCCGCTCCTGGCGATCTGGGGCATGGAGACCGGCTTCGGCAACGTCAAGGGCAACCAGAGGCTGGTCTCGGCGGTCGCCACCCTCGCCTATGACTGCCGCCGGTCCGACTTCTTCACCGAGCAGCTCTATGCCGCCCTGACGCTGATCGACCACGGGAGGCTCTCGCCCGACGAGCGCTCGTCCATGCACGGCGAGATCGGCCAGACGCAGTTCATGCCCAAGAACGTCCTCAACTACGGCCAGGGCAACCTCGACAGCGCGGCCGGCGCCCTGACCTCGACGGCGAACTTCCTGAAGGCGCACGGCTGGCAGGCCGGCGCGGGATATCAGCCCGGCGAGGCCAATTTCGGCGCCATCGAGGCCTGGAACGCCGCGTCGGTCTACCAGCGGGCGATCGCCATCATCGGCCACCAGATCGACGGCGGCTAA
PROTEIN sequence
Length: 266
MSTGGHYGAIGFAAWLALMAMAGTAAAAQCGNSAAGFEAWKKEFAGEASARGTGSRAISALMAASYSTATISADRGQKSFRLSLDQFMAKRGGSVIASRGKALKRSNAALFASIEQRYGVPPGPLLAIWGMETGFGNVKGNQRLVSAVATLAYDCRRSDFFTEQLYAALTLIDHGRLSPDERSSMHGEIGQTQFMPKNVLNYGQGNLDSAAGALTSTANFLKAHGWQAGAGYQPGEANFGAIEAWNAASVYQRAIAIIGHQIDGG*