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berkeley_reactor_200306_biofilm_scaffold_132831_14

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 13021..13491

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037EB8FA similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 118.0
  • Bit_score: 152
  • Evalue 1.80e-34
DNA binding family proteinMerR similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 145.0
  • Bit_score: 152
  • Evalue 6.80e-35
MerR, DNA binding family {ECO:0000313|EMBL:ADZ71662.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 145.0
  • Bit_score: 152
  • Evalue 3.30e-34

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
GTGATCGACGCGCTCTCTTCAGTCCTGTCCCCGCGCTTCGGCGCTCCCGCGAGCGAGGAGCGCCCCGGCCGCTTCACCATCCACGACCTCGTCGCCGAGTTCGGCATCACCGCCCGCACCCTGCGCTTCTACGAGGAGAAGGGGCTGCTCACCCCGGAGCGGCGCGGCTTGGAGCGCCTCTATTCGCGGCGCGACCGGGCGCGGCTGAAGCTGGTGCTGATGGGCAAGAGCGTCGGCTTCTCCCTGGAGGAGGTGCGCGACATGCTCGACCTCTACGACCTCGGCGACGGCCAGGCGACGCAGCTCACCGTGGCGCTCACCCGTTTCGAGGACAAGCTCCTGGAGCTGGAGGCGCGCCGGCGCGACATCGACCGGGCCCATGCCGAGCTCAGCCATGCCCGCGACATCGTCCGGGCCCGTCTGGCCGCCCTGGCCGAGCCCGAGCCGCCGCGGCACGCCCGGCCGCGATAA
PROTEIN sequence
Length: 157
VIDALSSVLSPRFGAPASEERPGRFTIHDLVAEFGITARTLRFYEEKGLLTPERRGLERLYSRRDRARLKLVLMGKSVGFSLEEVRDMLDLYDLGDGQATQLTVALTRFEDKLLELEARRRDIDRAHAELSHARDIVRARLAALAEPEPPRHARPR*