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berkeley_reactor_200306_biofilm_scaffold_132831_24

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(23802..24782)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF04B9 related cluster n=1 Tax=unknown RepID=UPI0003CF04B9 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 312.0
  • Bit_score: 392
  • Evalue 2.90e-106
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 308.0
  • Bit_score: 392
  • Evalue 1.10e-106
Transcriptional regulator protein {ECO:0000313|EMBL:ACM28354.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 308.0
  • Bit_score: 392
  • Evalue 5.20e-106

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCTCCAGGCGCGGCACCCGTCCGTTCGCATCGATGGAGCACACGCGATGCATCCCAGAATGCTCCGGGCCTTCCTGGCGGTCGCCCGCAGCGGCAACGTCACCCGGGCGGCCGAGGCGGTGCACCTGGCGCAATCGAGCGTCAGCGACCAGATCCAGGCCCTCGAAGCCGAGCTCGGGGCGAGCCTGTTCGCGCGCACCCGGCTCGGCCTGACATTGACGCCGGCGGGCGAGGCGCTGCGATCCTATGCCGAGGACATCCTGGCGCTGGACCAGGAGGCGCGGGCCGCGGTCGAGGCGGCGGCCGGACGCATGGCCGGCGCGGTCACCATCGGCGCGCTGGAGACCATCGCCGCGGTGAAGCTGCCGCGCTGGCTGTCGGATGTCTGCAAGGGCCACCCCGACATCGATATCCGACTGACGGTCGCGGGCAGCAGCGAGCTGCTGCGGGGCCTGGCTGAAGGCGGCATCGACGTCGCCTTCTGCTTCGACCAAGGCCGCCTGGACGAGCGCCTGGCCAGGCGGGTGATCGCGCGGGAGCCGCTGGTCCTCGTCGCGGCGCCCGGAGCGGCTGCGATGACCGGCGATCTCGCAGCGCTCGCCGCGGCCGGTTTCGTGGCGACCGAGACGGGCTGCGTCTACCGGCACCTGCTCGACACCGCCTTCGCCGAAGCCGGCCTGGCGGCGCCGAAACCCGTCGCGGAGGTCGGCAGCGTCCGCGCCATCGCGCAGCTGGTCGCCGCCGGCGCGGGACTGGGCCTGCTGCCGCGCCTGGCGGTGTCCGAGGCGCTGGCCCGCGGCGAGATCGTCGAGCAGCCCTGGCCCGGTCCGATGCGGACCGCACCGCTCGCCATGGTCTGGCGCCGCCGGCGCGTGCAGCCGCCGGCGCTGCAGCGCGTGCTCGCCGCCGCGGACGCGGCCTTCGCGCCGCTCAGACCAGCCGGTGCCCGCCCTCGACATGCAGCACCGTTCCGGTCGTGA
PROTEIN sequence
Length: 327
MLQARHPSVRIDGAHAMHPRMLRAFLAVARSGNVTRAAEAVHLAQSSVSDQIQALEAELGASLFARTRLGLTLTPAGEALRSYAEDILALDQEARAAVEAAAGRMAGAVTIGALETIAAVKLPRWLSDVCKGHPDIDIRLTVAGSSELLRGLAEGGIDVAFCFDQGRLDERLARRVIAREPLVLVAAPGAAAMTGDLAALAAAGFVATETGCVYRHLLDTAFAEAGLAAPKPVAEVGSVRAIAQLVAAGAGLGLLPRLAVSEALARGEIVEQPWPGPMRTAPLAMVWRRRRVQPPALQRVLAAADAAFAPLRPAGARPRHAAPFRS*