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berkeley_reactor_200306_biofilm_scaffold_132831_29

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 26775..28028

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE3FBF related cluster n=1 Tax=unknown RepID=UPI0003CE3FBF similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 412.0
  • Bit_score: 530
  • Evalue 1.10e-147
RNA polymerase sigma70 factor {ECO:0000313|EMBL:ESZ13855.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 412.0
  • Bit_score: 530
  • Evalue 1.60e-147
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 414.0
  • Bit_score: 524
  • Evalue 1.70e-146

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Taxonomy

Mesorhizobium sp. L2C085B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGCCGCCTGAGATGCAGCCCGGCCCCGCCTGGGAGACGGCGGAGGCGGTGGCGCGCCGCAGCTATGGGCGCCTGGTTGCGTCGCTGGCGGCGCGCATGCGCGATGTCGCCGGGGCGGAGGATGCTTTTTCCGAAGCGTTCGCCGCCGCCCTGGCGGACTGGCCGGCCAGGGGCGTGCCGGCCAACCCGGAGGGCTGGCTGGTGGCGGTGGCGCGGCGGCGGATGATCGATGCCGCGCGCCGCCGGGCCCTCGGCGAGAGTCTGGTCCCGGAGATGCGGCGCGCTGCCGAGGAGCTGGAGGAGATGGCAGGGAATCCGACACCGGTGCCGGACGAGCGCCTGCGGCTGATGTTCGTGTGCGCCCATCCCGCCATCGATCCGGCCGTCCGCGCCCCGCTGATCCTGCAGACCGTGCTGGGCTGGGACGCGGCGACCATCGCCTCGGCCTTCCTGGTCGCGCCCGCGGCCATGGGCCAGCGCCTGGTGCGCGCCAAGGCCAAGATCCGGCTCGCCGGCATCCCGTTCCGGGTGCCGGAACGCGCCGAGCTCGCCGAACGCCTGCAGGCGGTGCTCGATGCCATCTATGCCGTGTTTGCCGAAGGCTGGGCCGACCCGGCCGGCACCGGCAGCCGCAGCGGCAATCTGGCCGAGGAGGGCATCTGGCTCGGGCGGCTGGTCGTCACGCTGCTGCCGGGGGAGCCCGAGGCGCTCGGCCTGCTGGCGCTGATGCTGCACGCCCAGGCCCGGCGGCAGGCGCGGCGCGACGGCGCCGGCGACTATGTGCCGCTGACGCGGCAGGACGTGTCGCTGTGGGACGGCGGCCTGATCGGGGAGGCCGAGGCGCTGCTCGATCGCGCCGGCGCCATGGGTGCGCCGGGCCGCTACCAGCTGGAGGCGGCGGTGCAATCGGCGCACGCCGTGCGCCGGCACACCGGCCGTTCCGACTGGACGGCCGTCGAGCGGCTCTACGCCGCGCTGGCGGCCCTGACGGGATCGCCGGTCGTCGGCATCAACCGTGCCGTCGCCCTCGCCGAAGTCGAGGGGCCCGGGGCCGGCCTGGCGCTGCTCGAAGCGCTGGCGGGCGACCCGCGCCTGCGGGAGTACCAGCCCTACTGGGCCGCGCGCGCCGACTTGCTGCACCGGATCGGCGCCGTCGCGCCGGCGCGGGAGGCCTATCACCGGGCGATCGGCCTGGAATCCGACGCGGCGGTGCGCCGCTTCCTGCAGCGGCGCTGCGCCGAGCTGCCGCAGTGA
PROTEIN sequence
Length: 418
MPPEMQPGPAWETAEAVARRSYGRLVASLAARMRDVAGAEDAFSEAFAAALADWPARGVPANPEGWLVAVARRRMIDAARRRALGESLVPEMRRAAEELEEMAGNPTPVPDERLRLMFVCAHPAIDPAVRAPLILQTVLGWDAATIASAFLVAPAAMGQRLVRAKAKIRLAGIPFRVPERAELAERLQAVLDAIYAVFAEGWADPAGTGSRSGNLAEEGIWLGRLVVTLLPGEPEALGLLALMLHAQARRQARRDGAGDYVPLTRQDVSLWDGGLIGEAEALLDRAGAMGAPGRYQLEAAVQSAHAVRRHTGRSDWTAVERLYAALAALTGSPVVGINRAVALAEVEGPGAGLALLEALAGDPRLREYQPYWAARADLLHRIGAVAPAREAYHRAIGLESDAAVRRFLQRRCAELPQ*