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berkeley_reactor_200306_biofilm_scaffold_139709_15

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 18115..19434

Top 3 Functional Annotations

Value Algorithm Source
Tat protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B2E82D similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 442.0
  • Bit_score: 370
  • Evalue 1.20e-99
pectin lyase fold/virulence factor domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 444.0
  • Bit_score: 375
  • Evalue 1.40e-101
Pectin lyase fold/virulence factor domain-containing protein {ECO:0000313|EMBL:AJD40439.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 444.0
  • Bit_score: 375
  • Evalue 6.80e-101

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
ATGGTCATCGAACGGCGCTCCTTCCTCACCGCCGGCGCCAGCGCGCTGGCCGGCGGTGGCCTGATCGGCCCTGCCGCCGCGGCCGCGCCCGGCCTGAAGCCCGGCGGCGCCGACCAGTCGGCGGCTTTCGCCAAGGCCGTGGCGGCCGCCGCCGCGTCCGGCCGGCCGCTCCAGCTGGAGGCGGGCGCCTATCGCGTCGGCGGTGTCGCCGTGCCGCCCGGCACCCGCATCGAGGGCATTCCGGGCGCGACACGGCTGGTCGCGATCGGGCCCGGCCCGATCCTGCGGGCCGAGGGCGGCGGCGACCTCGCTCTCGCCGGGCTCACCTTAGACGGCGGCAATGCCGGCATGGACAAGGAGCAGGGGCTGGTGATGCTCTCGGGCCTTGCCGCGGTCGACATCCGCGATTGCCGCTTCCGGGCGACGCCCGGGCATGCCCTCGTGCTCCAGCGCTGCGGCGGCCTCGTCGAGACCTGCGCGTTCGAGGCGGTGCAGACGGCGATCTACGCCAATGATTCCGCCGGCCTCGCCATCCGCGGCAACCGGGTGCGGGGCTGCGGCGACAACGGCATCCTCGTGCATCGCAGCGAGAAGGGCTATGACGGCACGCTGGTGGTGCACAACCGCATCGAGAGCATCCGCGCCGACGGCGGCGGCCTCGGCTGGAACGGCAACGGCATCAACGTCTATCGCGCCGGGCATGTGGTGGTGGCCCAGAACGTCCTGCGCGATTGCGCCTTCAGCTTCATCCGCGCCAATTCCGCCGACGCGGTCGAGATCCTCGGCAATTCCTGCGACAGCGCCGGCGAGACCGGCATCTACAGCGAGTTTGCCTTCGAGGGCGCGGTGATCGCCCAGAACGTGGTCGAGCGCGCCGCCAACGGCATCTCGGTGGTCAATTTCGACAAGGGCGGCCGCCTCGCCACCGTGCAGGGCAACATCGTGCGCAGTGCCTTCCGACGCATCCTGCCGGAGGGCGGGCGCGAGAGCTACGGCTCCGGCATCGCCATCGAGGCGGATGCGACCGCCACCGGCAATGTCGTCGAGAACTGCCCGACCGCCGGCTTTTCGCTGGGCTACGGCAACTATCTGCGCGACGTCGTGCTGAGCGGCAACGTGGCGCGCCAATGCGGCGTCGGCGTCGCGATCACCGTGGCCGATGCGGCGCGCGGCGCCCTCGTCACCGGCAACGTCTTCTCCGGCTGTCCGGGCGGCGCGGTGGTCGGCTATGCCTGGGAGGACAAGGCGACCGGCGACCTGACGGCGGAGGGGACCGGCGCTTATCCCGGCATCGTGGTGACCGGCAACAGCGTGCGATAG
PROTEIN sequence
Length: 440
MVIERRSFLTAGASALAGGGLIGPAAAAAPGLKPGGADQSAAFAKAVAAAAASGRPLQLEAGAYRVGGVAVPPGTRIEGIPGATRLVAIGPGPILRAEGGGDLALAGLTLDGGNAGMDKEQGLVMLSGLAAVDIRDCRFRATPGHALVLQRCGGLVETCAFEAVQTAIYANDSAGLAIRGNRVRGCGDNGILVHRSEKGYDGTLVVHNRIESIRADGGGLGWNGNGINVYRAGHVVVAQNVLRDCAFSFIRANSADAVEILGNSCDSAGETGIYSEFAFEGAVIAQNVVERAANGISVVNFDKGGRLATVQGNIVRSAFRRILPEGGRESYGSGIAIEADATATGNVVENCPTAGFSLGYGNYLRDVVLSGNVARQCGVGVAITVADAARGALVTGNVFSGCPGGAVVGYAWEDKATGDLTAEGTGAYPGIVVTGNSVR*