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berkeley_reactor_200306_biofilm_scaffold_141566_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(7362..8339)

Top 3 Functional Annotations

Value Algorithm Source
Putative dipeptide ABC transporter, ATP-binding protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW70_BRASO similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 314.0
  • Bit_score: 345
  • Evalue 5.20e-92
ddpD; dipeptide ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 314.0
  • Bit_score: 345
  • Evalue 1.50e-92
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 324.0
  • Bit_score: 375
  • Evalue 6.60e-101

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGAGCGCCGAGCCGATCCTGCGCCTGGAGACTCTCAGTGTGGACTTCCCGGCTCCCCGCGGCGGCCGGTTCCGGGTTCTCGACCGGGTCTCGCTCGAGGTGGGGGCGGGGGAGACGGTCGGCATTCTCGGCGAGAGCGGCTCGGGCAAGTCCGTCACCGCCCTGGCGGTGATGGGCCTCCTCGACCGGAGCGCCGTGGTCGCCGGCGGTCGCATCCTGTTCGAGGGCGAGGACCTGCTCGGCCTGCCGGAAGCGCGGCTGCGCCGCCTGCGTGGTAGGCGGCTGTCGATGGTTTTCCAGCATCCCCGGCGCGCCCTCAATCCGGTCCGGCCGGTCGGCAAGCAGATTTCGGACGTGCTGCGCGCCCATGCCGGCCTGTCGCGCCGCCAGGCCCGGGACGAGGCCGTCGCCATGCTCGCCGGGGTCGGCATCCCCGATCCGGCGGCGCGGGCCTCTGCCTATCCCCATGAGCTCTCCGGCGGCACGTGCCAGCGCGTCATGGTCGCGCTGGCGCTGGCCTGCGCGCCCCGGCTCCTGATCGCCGACGAGCCGACGACCGGCCTCGACGTCACCACGCAGGCGCTCATCCTCGACCTCGTCGCCGGCCTGGCCCGCGAGCGCGGCATGGCGATGATCTTCATCACCCACGACCTCGCGCTCGCCGCGGAGCGATGCGATCGGCTGGCGGTGATGCATGCGGGGCAGCTCGTCGAGACCGGGCCGACGGCCGCCATCGTCGAGCGGCCGCGCCATCCCTACACGCGCCGCCTGCTCCGCGCGACGCCGGGCACCGGCGCGCGCCTCGAGGACCTCGTCGGCGTGCCCGGCCTCGCGCCGGACCTCTCCCGTGCCGATCTGCCGGCCTGCCGCTTTCAGGAGCGCTGCGAGCTGCGGATCGATCGCTGCCGCACCGAGGTGCCGCCGCTGCAGCCGCGCGCGCCGGGCCATTGCGCCGCCTGCTGGACCGTCGCCGCATGA
PROTEIN sequence
Length: 326
VSAEPILRLETLSVDFPAPRGGRFRVLDRVSLEVGAGETVGILGESGSGKSVTALAVMGLLDRSAVVAGGRILFEGEDLLGLPEARLRRLRGRRLSMVFQHPRRALNPVRPVGKQISDVLRAHAGLSRRQARDEAVAMLAGVGIPDPAARASAYPHELSGGTCQRVMVALALACAPRLLIADEPTTGLDVTTQALILDLVAGLARERGMAMIFITHDLALAAERCDRLAVMHAGQLVETGPTAAIVERPRHPYTRRLLRATPGTGARLEDLVGVPGLAPDLSRADLPACRFQERCELRIDRCRTEVPPLQPRAPGHCAACWTVAA*