ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_141566_7

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(10234..11853)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TRZ6_TISMK similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 535.0
  • Bit_score: 743
  • Evalue 1.10e-211
hbpA; extracellular solute-binding protein family 5 similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 535.0
  • Bit_score: 743
  • Evalue 3.10e-212
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:AFK55534.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 535.0
  • Bit_score: 743
  • Evalue 1.50e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tistrella mobilis → Tistrella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATGGGGTGGACGATGGACCGCAGGATTTTCTTGAAGGGCAGCGCGGCAGCCGGGGCCGCCGCCTGCCTGGGGGCCTGGCCGGACAGGGACGCCTTCGCGCAGGCGCGCGCGGAGACCCTGCGCGTGGTGGCGGAGGGGCGGCCGAACTCGCTGGATCCGCACGGCACGGGCGTCAGCCCGGCCTCGCTCGGCACCTTCTCCAACGTCTACGACAGGCTGATCCAGTTCGATCGCCGCGAGGTGTCGGCCGGCCTCTATCGCTACGACTATGCCAGGTTCACGGGCGAGCTGGCGCAGGCCTGGGAGGAGAGCGACGAGGGGCGCAGCCTCGTCTTCCACCTGCGCCCCGACGCGACCTTCCATGACGGCGCGCCGGTGACGGCCGAGGACGTGCGCTGGTCGCTCGCCCGCGGCGTCAGCCTGCCGGCCTCGAAGAACCAGCTGGCGACGGGGTCCTTGAAGGATGCCGCGCAGTTCGAGGTCGTCGACGCCCATACGCTGCGCATCAGGTTCGACCGCAAGGACCGCCTCACCCTGCCGAACCTGGCCCTGACTTTCGCCTCGGTCATCAATTCGGCGCTGGTGAAGAGCCATGCGACGGAGGCCGATCCCTGGGGCGCCGAATGGCTGCGCAGCAACGAAGCCGGCAGCGGCGCCTACCGGGTCGAGACGTGGAACCCCAGCCAGCAGGTGGTCTACAGCCGCTTCGACGGCTGGAAGGGCGGCGCGCTGCCCTATCTCAAGCGAGCGATCGTCCAGGTGGTGCCGGCGGCGTCCAGCCGGGTGGCGACGCTGAGAAAGGGCGACGCGGACATCGCGCTGCAGCTGCCGCCGCGCGACATCGACGCCATCGCCGGCGACAAGGCGGTCAAGGTCGTCTCCCTGCCGGTGACGAATTCCTTCCGCTTCGTCGCCTTCAACACCAGGCAGAAGCCCTTCGACGATGTGCGGGTGCGCCAGGCGATCGCCTATGCGCTGCCGTACAAGGACCTGCTCGAAGGGGCTGTCTTCGGCCACGGCACGCCGCTCTACGGGGCGAAATCGCGCGTTCCCGCCGAGGCCTCCTTTCCGCAGGCCTTCCCCTACGATACCGATCTCGACAAGGCGCGGGCGCTGCTCGCCGAGGCGGGGCTGGGCAGCGGCTTCGAGACGACGTTCAGCTACAACGTCGCCGACGCGACCATCGCCGACCCGATCGCGCTGCTGGTGCAGGAAGCGCTGGGCAAGCTCGGCGTCAAGGTGACGATCGAGAAGGTTGCGGAGGCGCAATGGGGGGCCCTGCTCACCCAGCGCAAGGTCCCGTTCTATGTCGAGGCCTCGTCGGCCTGGTTCAACGACCCCGACTATTTCTTCCGTATCTTCTTCCAGGGCGACTGGCGCTGGAACTTCGGCAATTTCCAGGACGAAGAGCTGGACGAGCTGGTCAATGCGGCGCGCTGGGAGACGGATCATGCCCGATATGACGAGGCGATCCGCAAGGCGATCGGCATCGTGTTCGACAAGGTGCCGATCGTCCTGTTGTGGCTGCCCTCCTTCGAGGCCGCCCTGCAGCCGCGGCTGGACGGCTTCACCTATTACATCCATGGCCAGGTGGACTTCCGCACACTCCGTAGCGCATGA
PROTEIN sequence
Length: 540
MGWTMDRRIFLKGSAAAGAAACLGAWPDRDAFAQARAETLRVVAEGRPNSLDPHGTGVSPASLGTFSNVYDRLIQFDRREVSAGLYRYDYARFTGELAQAWEESDEGRSLVFHLRPDATFHDGAPVTAEDVRWSLARGVSLPASKNQLATGSLKDAAQFEVVDAHTLRIRFDRKDRLTLPNLALTFASVINSALVKSHATEADPWGAEWLRSNEAGSGAYRVETWNPSQQVVYSRFDGWKGGALPYLKRAIVQVVPAASSRVATLRKGDADIALQLPPRDIDAIAGDKAVKVVSLPVTNSFRFVAFNTRQKPFDDVRVRQAIAYALPYKDLLEGAVFGHGTPLYGAKSRVPAEASFPQAFPYDTDLDKARALLAEAGLGSGFETTFSYNVADATIADPIALLVQEALGKLGVKVTIEKVAEAQWGALLTQRKVPFYVEASSAWFNDPDYFFRIFFQGDWRWNFGNFQDEELDELVNAARWETDHARYDEAIRKAIGIVFDKVPIVLLWLPSFEAALQPRLDGFTYYIHGQVDFRTLRSA*