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berkeley_reactor_200306_biofilm_scaffold_141566_11

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: comp(15642..17411)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 5 n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WM95_PANSA similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 528.0
  • Bit_score: 827
  • Evalue 6.30e-237
extracellular solute-binding protein family 5 similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 528.0
  • Bit_score: 827
  • Evalue 1.80e-237
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADU72530.1}; Flags: Precursor;; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 528.0
  • Bit_score: 827
  • Evalue 8.80e-237

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Taxonomy

Pantoea sp. At-9b → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1770
ATGCGGGCAGGCGCCCGCTCGGATTTGCGCGGGGATCCCATGTCTTTGCAGGTCGACTTTCCGGCTTCTGGTGCCGATCGAATTGCCGCTCCTCATGCCTGCGGGTGGCCGGGTGCGGGCCGAAGGCGCGAGATTCGCCGCCGCTTCCGGTCGACCGTCGCCGCGACGGCCTTGGTCGCCGCGCTGTCGTCCGCCGGCCTCGATGCGGATTCGGTCCGGGCCGGGGGCGCGCCGGTTGCCGGCGGCACCCTGACCTACGCGACCGACCGCGAGCCGACCTGCCTCGACCCGCATGTCGACGGCGACATGCCGCAGGTCTTCGTCGCCCAGCAATTCCTCGATTCGCTCGTCTCGATGGACCAGGACGGCCATATCGGTCCCTGGCTCGCCAGGAGCTGGACCGTCTCGCCCGACGGCAAGACCTACACGTTCAAGCTGAGGGACGATGTCACCTTCAGCAATGGCGAGAAGTTCACCTCGGCCGCCGTCAAGGCCAACCTCGACCATATGGTCGATCCGGCCACCCAGTCTTCGACGGCCGGCGGCTATGTCAGGCAATATGTCGGGACCGATACCCCGGACGACCTGACGGCCGTGGTGCATCTGTCCAAGCCCTATGCCGCCTTCCTCGAGGTCCTGGCGCAGGGCTTCCTCGGCATCGAGGCGCCGTCGGCGCTGAAGCGTTCGCGCGACGAGAACTGCCAGAGCCCGGTCGGGTCCGGGCCGTTCAAGGTCACGCGCTGGGACCATCAGAGCCAGGTGGTGCTCGAACGCAATCCCGACTACCGCTGGGCCCCGCTGACCGCACGGCACCAGGGACCGGCCTATCTCGACAAGATCGTCTGGAAGTTCATCCCCGAGCCGTCCGTGCGCTTTGCCGCCCTGCAGAACGGCAGCGTCGACGTCATCGAGGCGGTTCCGCCGGAATCCGAGGCTGCCGCCGAGAAGAACCCGGACCTGACCCTGATCGTCAAGGACCGCCCGGGCAACCCGACCAACGGCGAATTGAACACCAGGCGCGCGCCCTTCGACGATATCCGGGTCCGCGAGGCCTTCGTGCGCTCGGCCGATATCGACGGCGCCCTCGCCAGCGTCTATTTCGGCCGCTATCACCATGCCACCGGCCCGCTGAGCGCGGTGACGCCGTTCTACAGCGGCGATTTCCAGCATGCCGACGACTATGATCCGGACCGGGCCAACAAGCTGCTCGACGAGGCCGGCTGGACCGAGCGCGATTCCTCCGGCCTGCGCTCCAGGAACGGCCAGCCTCTGGCCGTGCACATCCCGATCGGCGCCTCGATCGGCCCGGCCGAACGGTCCTTGTGGGAGCAGGTCCAGGCGACGGCCGGGCAGGTGGGGTTCGACGTCCGGCTGGAGCCGGTCGGCGACACGGAATCGAGCGAGCGCCAGGGCAAGTGGGACTATGACGTCACGCTCGACTACTGGAACACCAACACGGCCGACGTGCTGCGCATCGTCTTCGGATCCGAGTTCCTCGGCGCCGCCGGATCGGGCGGCTATCACCAGAACGGCTCCGGCCTGCAGAACGCCGCCTTCGACGACACCGTCGAGAAGGCCCTGGAGACGCAGGACGAGGCCACGCGCCGCGGCCTCTATCGCCAGGCGCAGGAGCTGATCTCCGGCCAATATCTGCAATTGCGGACCTATCCCCAGAGCACGCGCCTCGGCGTCTATAAGACGGCCCACGACGTGCGGCTGGAGCCGTCCCTGACCGTCACCACGCTCTACGACGCCTGGGTCTCGAAATGA
PROTEIN sequence
Length: 590
MRAGARSDLRGDPMSLQVDFPASGADRIAAPHACGWPGAGRRREIRRRFRSTVAATALVAALSSAGLDADSVRAGGAPVAGGTLTYATDREPTCLDPHVDGDMPQVFVAQQFLDSLVSMDQDGHIGPWLARSWTVSPDGKTYTFKLRDDVTFSNGEKFTSAAVKANLDHMVDPATQSSTAGGYVRQYVGTDTPDDLTAVVHLSKPYAAFLEVLAQGFLGIEAPSALKRSRDENCQSPVGSGPFKVTRWDHQSQVVLERNPDYRWAPLTARHQGPAYLDKIVWKFIPEPSVRFAALQNGSVDVIEAVPPESEAAAEKNPDLTLIVKDRPGNPTNGELNTRRAPFDDIRVREAFVRSADIDGALASVYFGRYHHATGPLSAVTPFYSGDFQHADDYDPDRANKLLDEAGWTERDSSGLRSRNGQPLAVHIPIGASIGPAERSLWEQVQATAGQVGFDVRLEPVGDTESSERQGKWDYDVTLDYWNTNTADVLRIVFGSEFLGAAGSGGYHQNGSGLQNAAFDDTVEKALETQDEATRRGLYRQAQELISGQYLQLRTYPQSTRLGVYKTAHDVRLEPSLTVTTLYDAWVSK*