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berkeley_reactor_200306_biofilm_scaffold_141566_12

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 17745..18926

Top 3 Functional Annotations

Value Algorithm Source
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F2G5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 393.0
  • Bit_score: 553
  • Evalue 1.50e-154
Putative hydroxylase {ECO:0000313|EMBL:GAJ97006.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 393.0
  • Bit_score: 680
  • Evalue 8.90e-193
hydroxylase similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 393.0
  • Bit_score: 542
  • Evalue 5.80e-152

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGGCGCACGACGTGGCCCGCCGGATCGAGGAGTTCGGCCCGGAATTGGCGGAGCAGGCTCCGGAGAACGAGCGTCTGGGCAAGCTGAGCGACAGATCGGCGGCGCTGCTGCGCTCGTCGGGATTGATGCGCCTGCTGCAGCCCCGCGAGCATGGCGGGCTGGGGGGCACGCCCGCCGACTTCCTGGAAGCGGTGATCACCGCGGCGCGCCACGACGGATCGACGGGCTGGGTCGCCGGCGTCGTCGGCGTCCATCCCTGGGAGGTCGCGCTGTTCGATCCCAGGCTCGGACAGGAGATCTGGGGGCAGAACCAGGACACCTGGGTGGCCTCGCCCTACACGCCTTCCGGCATCGCCGAGCCCGCCGAGGGCGGCTACATCCTCACCGGACGGTGGCAATTCTCGTCCGGCACCGATCACTCCGACTGGGTCTTCCTGGGTGCCCTGCTCGGCAACGGGCAGGGAAAGCCCGCGATGCCGCCTCGGATGATGCATGTGATCCTGCCGCGGTCCGACTATCGGATCATCGAGGATTCGTGGGACGTGATCGGCCTGCTGGGCACCGGCAGCAAGGATGTCGTCGTGCAGGGCGCCTTCGTTCCCGCCTATCGCGCGATCGACCACGAGGCGATCGCATCGGGCGCCGCCGCTGACAAGGCCGGGCTGAGCGATCCGATCTACAGGCTGCCGTTCTCCGTGATCTTTCCCGTCGGCATCACCGGCGCGATCATCGGCATGGCCGAGGGCGCCCTCGCCGCCCACGGCGCCTATCAGCGCGACCGCGTCTCCGCAGCCGGCGCGCGGATTCGCGACGATCCCTACGCGGCCTATTTCACCGGCGAGGCCGCCTCCGAGATCCAGGCCTCGAGGGTGCAGCTGTTCGACGGGATCACCAGGGCCTACGACCAGGTGATGTCCGGCAGGCAGGTCACCTTCGAGGATCGGTCGCGGATCCGGCGCAACCAGATCCGCTGCGCCTGGCGGGCCGTTGCCGCCATCGACGCGATCTATGCGCGCTCAGGCGGGAACGCGAGCCGGCGCACCAATCCGATCCAGCGCTTCTGGCGCGATGCCCATGTCGGCCTCAACCACTTCATCCACGTTCCCGGCCCCACCTACCATGCCGACGCGATGATCCAGTACGGACTGGACGTGCCCGATCCGCTGCGCATGGGCATCTGA
PROTEIN sequence
Length: 394
MAHDVARRIEEFGPELAEQAPENERLGKLSDRSAALLRSSGLMRLLQPREHGGLGGTPADFLEAVITAARHDGSTGWVAGVVGVHPWEVALFDPRLGQEIWGQNQDTWVASPYTPSGIAEPAEGGYILTGRWQFSSGTDHSDWVFLGALLGNGQGKPAMPPRMMHVILPRSDYRIIEDSWDVIGLLGTGSKDVVVQGAFVPAYRAIDHEAIASGAAADKAGLSDPIYRLPFSVIFPVGITGAIIGMAEGALAAHGAYQRDRVSAAGARIRDDPYAAYFTGEAASEIQASRVQLFDGITRAYDQVMSGRQVTFEDRSRIRRNQIRCAWRAVAAIDAIYARSGGNASRRTNPIQRFWRDAHVGLNHFIHVPGPTYHADAMIQYGLDVPDPLRMGI*