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berkeley_reactor_200306_biofilm_scaffold_141566_18

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 24340..25143

Top 3 Functional Annotations

Value Algorithm Source
2-oxopent-4-enoate hydratase (EC:4.2.1.80) similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 270.0
  • Bit_score: 367
  • Evalue 3.00e-99
2-oxopent-4-enoate hydratase n=1 Tax=Frankia sp. CN3 RepID=G6H6T4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 263.0
  • Bit_score: 373
  • Evalue 1.50e-100
2-hydroxypenta-2,4-dienoate hydratase CmtF {ECO:0000313|EMBL:GAJ96998.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 265.0
  • Bit_score: 406
  • Evalue 2.90e-110

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAGCGTCGGGTCTGACGGCCTCCTGGCCGCCGTCGAGCGTCTGGAACGCGCGAGCGCCGCTCGCCTGCCCTGTCCGCCGATCGTCGATCTGATCGGCCCGAGCGACATCGCCGCGGCCTACGAGGTCCAGCAGCATATCGCCGCCCGCCGGATAGCCGCCGGCGCGCGCCTGATCGGGCGGAAGATCGGCCTGACATCGGCGGCGGTGCAGGCGCAGGTGGGCGTCGACCGGCCCGATTTCGGCGTGCTGCTCGACGACATGCGCTACGAGGACGGCGCGGACATTCCGTTCGCACGGCTGCTGCAGCCTAAGGCCGAGGCGGAGGTGGCCTTCCTTCTGGCGCGCGACATCGGCGATGCGCCGGATGCCGCCGCCGTGCGCGGCGCGGTGGCGCTCGCCTTCCCCGCCATCGAGATCGTCGACAGCCGGATCGCGGACTGGCGGATCGGGATCACCGACACGGTGGCGGACAACGCCTCGTCGGGGGTGTTCGTGATCGGATTGGCGGGGACGCCGCTCGATGCGGTGGAGCCGGCCGACGTCACGATGACGCTCCGCCGGAACGGCGAGCTGGTCTCGCAGGGCACCGGGCGGGCCTGCCTGGATGATCCGCTGAATGCGCTGGCATGGCTGGCGAGAACGGCGATCGAGCTGGGCGCGCCGCTGCGCGCCGGGGACATCGTGCTGTCGGGAGCGCTCGGGCCGATGGTCGCCGTGCGGCCCGGAGACGTCTTCGAGGCGGCGATCGCGCCGCTGGGGACGATCACCGCCCGGTTTTCACGAGAGGGAGGCATCGCATGA
PROTEIN sequence
Length: 268
MSVGSDGLLAAVERLERASAARLPCPPIVDLIGPSDIAAAYEVQQHIAARRIAAGARLIGRKIGLTSAAVQAQVGVDRPDFGVLLDDMRYEDGADIPFARLLQPKAEAEVAFLLARDIGDAPDAAAVRGAVALAFPAIEIVDSRIADWRIGITDTVADNASSGVFVIGLAGTPLDAVEPADVTMTLRRNGELVSQGTGRACLDDPLNALAWLARTAIELGAPLRAGDIVLSGALGPMVAVRPGDVFEAAIAPLGTITARFSREGGIA*