ggKbase home page

berkeley_reactor_200306_biofilm_scaffold_141566_21

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 27173..28183

Top 3 Functional Annotations

Value Algorithm Source
Metapyrocatechase (Catechol 2,3-dioxygenase) n=3 Tax=Amycolatopsis mediterranei RepID=D8I6I0_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 332.0
  • Bit_score: 448
  • Evalue 3.50e-123
Putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:GAJ97001.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 336.0
  • Bit_score: 594
  • Evalue 7.20e-167
metapyrocatechase (catechol 2,3-dioxygenase) similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 332.0
  • Bit_score: 448
  • Evalue 9.80e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGACACGCGGCTACGACCCGGGGCCCCGGATCGCCCATGCCGGAGGCATCAACATCGGCACCCCGGACCTCGAGCGCTCGCTCTGGTTCTTCCGCGACCTGTTCGGCATGGAGGTGACCGCCGAGGATGACGGCGTCGCCTATCTCAGGGGCTACCAGGAGTGGGACCACCACTGCCTCGTGCTGACCCAGCAGGACGAGGCGATCATCAATGCCTACAGCTTCCGCGTCGCACGGCCCCAGGACGTCGAGCTGTTCCATGAGCAGCTCACCGCCGAGGGCCTCGACGTCCGGGTGCTGCCCGCGGGGAGCGAGACGGGCCGCGGCGAAGCGATCCGCTTCCTCATCCCCGGTGGCGGCCACCCCATCGAGCTGTTCCACGACATGGCAAGGCCGCAGCCGCCCGCGGGCCTGCGCTCGCGCCTGCCGGGCAACAGCTCGCGCCGGCGCGGACTCGGCGTGCGGCGGCTCGACCATCTCAACGTCATGACCAGCCCCGCCACGATCAATCAGGCGGAGGCCTGGCTGCGCGAGAGCCTCGGGTTCAGGCGTCGCGAATTCCTGACGCTGCCGCAGGCGCCGGGCCTGATCCTGGCCTCGTGGCTGTCGGTCAACTCGAAGCTGCACGACATCGCGATCGGCGCCGCGCCGAACGGGCAGGATGCGCAATTCCACCACGTCGCCTTCGCGATCGAGAACTTCCACGACATGCTGACGGCGGCCGACCAGCTCAAGGACCTCGACATCCAGATCGATGCCGGGCCGGGCAAGCACGGCATCGGCCAGGCCATGTATCTCTACCTTCGCGATCCCGGCTCCGGACACCGGATCGAGCTCTATTCGGGCGGCCGGGAGTTCTTCGAGCCCGACTGGGAGCCCATCGAGTGGAAGGCCGACAACCCGATCGGCCTGACCTGGTACGGGGACCTGCCCTCGGTCGACCCGCAGACCAGCTCCTATGTCACGACGACGCCCTCCGCGGGGCTCGACCTGCCGCACCGGCGCACGTGA
PROTEIN sequence
Length: 337
MTRGYDPGPRIAHAGGINIGTPDLERSLWFFRDLFGMEVTAEDDGVAYLRGYQEWDHHCLVLTQQDEAIINAYSFRVARPQDVELFHEQLTAEGLDVRVLPAGSETGRGEAIRFLIPGGGHPIELFHDMARPQPPAGLRSRLPGNSSRRRGLGVRRLDHLNVMTSPATINQAEAWLRESLGFRRREFLTLPQAPGLILASWLSVNSKLHDIAIGAAPNGQDAQFHHVAFAIENFHDMLTAADQLKDLDIQIDAGPGKHGIGQAMYLYLRDPGSGHRIELYSGGREFFEPDWEPIEWKADNPIGLTWYGDLPSVDPQTSSYVTTTPSAGLDLPHRRT*