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berkeley_reactor_200306_biofilm_scaffold_141566_25

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 31859..32446

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EQS5_METSB similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 187.0
  • Bit_score: 142
  • Evalue 4.00e-31
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 187.0
  • Bit_score: 142
  • Evalue 1.10e-31
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACK49346.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.3
  • Coverage: 187.0
  • Bit_score: 142
  • Evalue 5.70e-31

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Taxonomy

Methylocella silvestris → Methylocella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCCGACTCTGCCCCAGAGAAAGCGCGACCAGCGGCACATGCACCTGCTGCATGCCGCCCGGCGCTGCTTCGAGGCGCAAGGCTACCACCCGACCACGATGGAGGACATCATCCGCGCCTCCGGCTTCTCGGCGGGCGCGGTCTATCGCTATTTCAAGAGCAAGGACGACCTCATCCTTGCCGCCGCCGAGGCTTCCATGGCGGAGCTTGCCGAGGCGTTCGCGCCTCTGCTTCGACGCGAGCCCATTCCGGCCCCGAAGGACTTCGTCCGGCTGCTCACGCATGCGATCGACACGGTCTCGCGCAGGGGCGACGTCGATCTGAGACGGATGGCCCTGCTGGGATGGGCGGAAGCCCAGCGCAACGAGCAGATCCGCGCGAAGCTGCGCGCGCATCACGATCGCCTCCTGCTCGACCTCGCACGCGTGGCGGAGCGGTGGGAGGAGAGCGGCGCGGCGGTCCGATCGGACAGGACCGCCGTGGCCAGGACATTGCTCGCGCTGGTTCTCGGCCTTGTCGTCCAGGGCGCTCTCGTCGAAGCAGGCCATGTCGAGGCGTTCGACGAGACCGTCCATCTCTTCCTTTGA
PROTEIN sequence
Length: 196
MPTLPQRKRDQRHMHLLHAARRCFEAQGYHPTTMEDIIRASGFSAGAVYRYFKSKDDLILAAAEASMAELAEAFAPLLRREPIPAPKDFVRLLTHAIDTVSRRGDVDLRRMALLGWAEAQRNEQIRAKLRAHHDRLLLDLARVAERWEESGAAVRSDRTAVARTLLALVLGLVVQGALVEAGHVEAFDETVHLFL*