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berkeley_reactor_200306_biofilm_scaffold_141566_26

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 32892..35816

Top 3 Functional Annotations

Value Algorithm Source
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 964.0
  • Bit_score: 1632
  • Evalue 0.0
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1) similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 965.0
  • Bit_score: 1493
  • Evalue 0.0
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F4871 similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 938.0
  • Bit_score: 1581
  • Evalue 0.0

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2925
ATGTCTCTCCCCGTCGGACCGCATGGGGACAAGATGCCGGCGACCGCGCTTCATACCACTGGGACTCATCAGGCTCCGATCCTCGTCGAGCGCGAGGAGCGCGCAACGGCCGAGCCCGGCTATCGCGTGATTCGCCGCAACGGGACGGTGACGCCGTTCGATGCGGGCAAGATCACGGTCGCGCTGACCAAGGCGTTCCTGGCGGTCGAAGGCGCCGGGGCGGCCGGCTCGCCCCGCGTGCACGACGTCGTTCAGGACCTGACGGACCAGGTCGTCGCGAACCTGACGCGCCGCGTCGGCGAAGCGCGCACGTTCCATATCGAGGACGTGCAGGATCAGGTCGAGCTGGCGCTCATGCGCGGCGAGCATCACAAGGTGGCGCGCGCCTATGTGCTCTATCGGGAGGAGCGGGCCCGCCGGCGGGCGGCTGCGAAAGCTGCGGATGCACGCCCGGCGGTCCCGGCGCTCCGCGTCAAGGCCGAGGACGGCAGCCTCGCGCCACTCGACGAGATCCGCTTCGCCACCATCGTCGAGGAAGCCTGCGCAGGGCTGGACGATGTCGCGGCGGCGCCGGTCATCGGCGAGGCCCGGCGCAATCTCTACGACGGCATCACGCTGGACGAATTGTCGCTGGCGCCGATCCTGGCGGCCCGCACCCTCGTCGAGCAGGAGCCCAACTATGCCTTCGTCTCGGCGCGCCTGCTGCTCGACAGGCTGCGGCGGGAGGCGCTGTCCTTCGTGTCCGGCGCGCCGGAACAGGCGACGCACGCTGAGATGAGCACGCGCTACGCCTCGTATTTTCCGGCCTTCGTGCGCACCGGCATCGAGGCCGAGCTGATCGATCCGGAGCTCGGTCGCTTCGACCTCGCCAGGCTGGGCGCCGCCCTGAAGCCCGAACGCGACCTGCAATTCCAGTTCCTCGGGCTGCAGACGCTCTACGATCGCTACTTCCTGCACGCCAGGGGCAAGCGCTTCGAGCTGCCGCAGGCCTTCTTCATGCGCGTCGCCATGGGCCTCGCCGTGCGCGAGATCGACCGCGAGGAGCGGGCGATCGCATTCTACCACCTCCTGTCGTCCTTCGACTTCATGGCGTCGACGCCGACGCTGTTCAACGCGGGCACGCTGCGCCCGCAACTGTCCTCCTGCTTCCTCACCACGGTCGCCGACGACCTCGACGCCATCTTCAAGGGCATCAAGGATAATGCTTTGCTGGCAAAGTATTCCGGCGGCCTCGGCAATGACTGGACCCCGGTCCGCGGCCTCGGCGCGCATATCAAGGGCACCAACGGCGAGAGCCAGGGCATCGTGCCGTTCCTGAAGGTCGCCAACGACACCGCCATCGCGGTCAACCAGGGCGGCAAGCGCAAGGGGGCGGTCTGCGCCTATCTGGAGACCTGGCACGTCGATATCGAGGAGTTCCTCGACCTCAGGAAGAACACCGGCGACGACCGTCGCCGCACCCACGACATGAACACCGCCAACTGGGTGCCGGACCTGTTCCTGGAGCGCGTCGAGGCGGACGGCGAATGGACGCTGTTCTCGCCGGACGAGGTGCCCGACCTGCACGAGCTCACGGGAAGCGCGTTCCGCAAGGCCTACGAAGCCCATGAGGCCCGGGCGGCGGCCGGCGGCATCAAGGTCCATCGCAAGGTCCGGGCGCTCGATCTCTGGCGGCGCATGCTGACCATGCTGTTCGAGACCGGGCACCCCTGGATCACCTTCAAGGATCCCTGCAACATCCGCTCGCCGCAGCAGCATATCGGCGTGGTGCGTTCCTCGAACCTGTGCACCGAGATCACCTTGAACACCTCGAAGGACGAGGTCGCCGTCTGCAATCTCGGCTCGGTCAATCTCGCCAACCACGTGACGGAGGCGGGCCTCGACCTCGGCCGGCTGGCCGCGACGGTCGGCACGGCGATGCGCATGCTCGACAACGTCATCGACATCAATTTCTACACGATCCCCGAAGCGCGGCGCTCCAACCTGCGGCACCGGCCGGTCGGCCTCGGCGTGATGGGCTTCCAGGACGCGCTGCAGACGCTGCGCATCCCCTATGCGTCGGATGCGGCGGTGTCGTTCGCCGACGAGAGCATGGAGGCGGTGAGCTACCATGCGATATCGGCCTCGGCCGACCTGGCGGCCGAGCGCGGGCGCTACCCGAGCTTCGAAGGCTCGCTGTGGTCGAAGGGCATCCTGCCGATCGATTCCATCCGTCTGCTGCAGGACGAGCGGCCGGGCGTCGACATGGATCGATCGTCCCGGCTCGACTGGGCGGCGCTGCGCGAGCGGGTCAGGACGACCGGCATGCGCAACTCGAACACGATGGCGATCGCGCCGACCGCGACGATCTCCAACATCTGCGGCGTGGCGCAGTCGATCGAGCCCGCCTACCAGAACCTGTTCGTCAAATCGAACATGTCGGGCGACTTCACCGTGCTGAACCCCCAGCTCGTCCACGATCTCAAGGCCCGCGGCCTGTGGGACGAGGTGATGGTGTCCGATCTCAAATATTTCGACGGGTCCGTCGGCCAGATCGACCGGGTGCCGCACGACCTCAAGGCACTGTATGCGACGGCCTTCGAGATCGAGTCCGCCTGGCTGATCGAGGCCGCGTCCCGGCGCCAGAAATGGATCGACCAGGCCCAGTCGCTGAACCTCTACATCGCCAATACCAGCGGCAGGAAGCTCGACGAGCTCTACAGGCTCGCCTGGCGCAAGGGGCTCAAGACGACCTACTATCTGAGGTCCCGGTCGGCCACCCATGTGGAGAAGTCGACCCTGAAGGGCACGGACGGCAAGCTCAACGCCGTGCTGGCCACCCTCGCCGCCGCGCCTGCCGCGGCCGAGGCGATCGCCGCGCAGGCCGACGGCCCGTGGGGCAAGGCCTGCGCCATCGACGATCCCGATTGCGAAGCCTGCCAGTGA
PROTEIN sequence
Length: 975
MSLPVGPHGDKMPATALHTTGTHQAPILVEREERATAEPGYRVIRRNGTVTPFDAGKITVALTKAFLAVEGAGAAGSPRVHDVVQDLTDQVVANLTRRVGEARTFHIEDVQDQVELALMRGEHHKVARAYVLYREERARRRAAAKAADARPAVPALRVKAEDGSLAPLDEIRFATIVEEACAGLDDVAAAPVIGEARRNLYDGITLDELSLAPILAARTLVEQEPNYAFVSARLLLDRLRREALSFVSGAPEQATHAEMSTRYASYFPAFVRTGIEAELIDPELGRFDLARLGAALKPERDLQFQFLGLQTLYDRYFLHARGKRFELPQAFFMRVAMGLAVREIDREERAIAFYHLLSSFDFMASTPTLFNAGTLRPQLSSCFLTTVADDLDAIFKGIKDNALLAKYSGGLGNDWTPVRGLGAHIKGTNGESQGIVPFLKVANDTAIAVNQGGKRKGAVCAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFLERVEADGEWTLFSPDEVPDLHELTGSAFRKAYEAHEARAAAGGIKVHRKVRALDLWRRMLTMLFETGHPWITFKDPCNIRSPQQHIGVVRSSNLCTEITLNTSKDEVAVCNLGSVNLANHVTEAGLDLGRLAATVGTAMRMLDNVIDINFYTIPEARRSNLRHRPVGLGVMGFQDALQTLRIPYASDAAVSFADESMEAVSYHAISASADLAAERGRYPSFEGSLWSKGILPIDSIRLLQDERPGVDMDRSSRLDWAALRERVRTTGMRNSNTMAIAPTATISNICGVAQSIEPAYQNLFVKSNMSGDFTVLNPQLVHDLKARGLWDEVMVSDLKYFDGSVGQIDRVPHDLKALYATAFEIESAWLIEAASRRQKWIDQAQSLNLYIANTSGRKLDELYRLAWRKGLKTTYYLRSRSATHVEKSTLKGTDGKLNAVLATLAAAPAAAEAIAAQADGPWGKACAIDDPDCEACQ*