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berkeley_reactor_200306_biofilm_scaffold_151446_4

Organism: 2019_SCN_bioreactor_200211_biofilm_Rhizobiales_70_15

near complete RP 48 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 4321..6681

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYU4_ROSS1 similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 702.0
  • Bit_score: 655
  • Evalue 4.40e-185
DctM-like transporters {ECO:0000313|EMBL:CEJ14402.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 801.0
  • Bit_score: 961
  • Evalue 5.20e-277
TRAP transporter, 4TM/12TM fusion protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 702.0
  • Bit_score: 655
  • Evalue 1.20e-185

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 2361
ATGCGCGAAACCGAGACCAGGGTCGAGCTGACCGAGGAGGAGCTGGAGACGCTCTCTTCCGACAACGAGGGCGGGCCGGCCGCCAAGGTGACGGGCTGGCTCGGCTGGCTCACCGCCGCCGCGCTGTTCGCCCTCTCGGCCTATGCGCTCTACTGGACCCAGTTCTCCGTCAACACCACGGTCTACCGCGTCAGCTTCCTCGCCGTGGTGCTGATGCTGGTGTTCCTGCTCTATCCCATCGTGCGCGGGGAGCCGCACCGGCCGCGGCCGGCGACGCCGGAGGAATGGCTCTGCGGCCTCGTCGGCGTCGCCTGCTGCGTGGCGCTGGCGGCGCAGAGCGGCATCTTCAGCCGCAGCCCCTGGGCCGGCCTCCAGCTGGCGCTGGTCGCCCTGTGCTTCGGCCTCGCCCCCTTCGCCACCCGCAGCCGCGTGCTGATCGAGACCCGTGCCCTCGACTGGATCCTGGTCGGCCTCACCCTTGCCACGGCGCTGGTCCTGTCGCTGACCATCGACGACTACAAGGCACGGCCGACCCGGCCGACGCCGGAGGAGCTGGTGCTCGGCGGCGCGCTGATGCTGTTCGTGCTGGAGGCGAGCCGGCGCACGGTCGGCTGGGTGCTGCCGGCGATCGCCCTCGCCTTCCTGCTCTACTGCAGCTTCGGGCCATGGATGCCCGAACCGTTCGACCATCGCGGCTTCTCGCTCGGGCGCATCATCGGCCAGAACGCGCTGACGCTGGAGGGCCTGTTCTCGACGCCGCTCGACGTCGCCTCCAGCTTCATCATCCTGTTCACCATCTACGGCGCCGTGCTGGAGCGGGGCGGGGCCGGCAAGTTCTTCATCGACTGGGCCTTCGCCCTGTTCGGCAAGCGCCCCTCGCCCTCCGCGCCCGGACGGGCGGTGGTGACCTCCGGCTTCCTGCTCGGCACGGTCTCGGGCTCCGGCGTCGCCACCACCGTGACCATCGCCTCGCTCGCCTGGCCGATGCTGCGGCGTTCCGGCTACACGCCCAACGTCGCCGGCGGCATGCTGTCGGCGGCCGGGATCGGCGCCACCTTGTCGCCGCCGACGCTGGGCGCGGCCGCCTTCATCATCGCCGAGTACCTCAACGTCGATTATCTCGACATCCTGGTCTACGCCACGATCCCGACGCTGCTCTACTACCTCGCCTGCTGGCTGACCACCGAGGCGGATGCCCGCAAGCTCGGGGTCAAGCCGGTCAAGACCTCCGACGCCTCGCTGTGGGAGCTGACGCGGCGCGAGGGCTACCACTTCCTCTCCCTCGCCGCGATCGCCGTGTTCCTGCTGCTCGGCTTCACCTCCTTCATGGCGGTGTTCTGGTCGATCGCCATCGCCTTCGCCCTGTCGATGATCCGGCCGCACAGCCGCCTCGTGACGCCGTCCGCCTTCGTTTTGGGGCTGGCCGCCGGGGCGGCGGCGTGGATCGCCGGCCGCTCCGGCGCCGCCGCCGGGCTCGGCCTCGGCAACCTCTTCGACGCCCGCCTCTCGGTGGCGGTGTTCTGGGGCATGGCGGCGGCGGTCGCCGCCTCGGGCGTGCAGACGCTGCTCGCCCGGCGCGCCGGCCGCGAGGCCGACCCGGCGGCGACGCGCATGATCGCGGCGCTGGTGGACGGCGCCCGCGCCCTGCTCGGCATCGGCGCGATCTGCGCCTGCGCCGGCATCATCGTCTCGGTGGTCAACCTCACCGGCCTCGGCCTGACCATCTCCTCGATCATCGTCACCCTCGGCGGCGGCGACCGGCTCGCGGTCATCCTGCTGGCGGCGGTCGCCATGTGGGTGCTCGGCACCGCCGTGCCGGTGACGGCGAGCTACATCATCGCCGCGGTCATGCTGGTGCCGGCGCTCACCAATGTCGGCGTGCCCGAGGCGGCGGCGCACATGTTCATGTTCTACTACGCCGTGCTGGCCGACGTCTCGCCGCCGACGGCGCTTGCCCCCTTCGCCGCCGCCGCCATCACCGGCGGCACGCCGTTCAACACCATGCTGCAGGCCTGGAAATACACCCTGCCGGCCTTCCTGGTGCCGTTCATGTTCTGCCTGACGCCGAACGGGCTCGGCCTGCTGATGCTGACCCCGGACGGACACTGGCCGATCACGGCGATCGACTGGCTCGCGGTGCTCATCACCACGCTCACCTCCTGCCTGGCGCTGCTGGGCCTGTCGGTGGGCGCTACCGGCTACGCCCTGCGCCCGGTCAACGCCGTCGAGCGCTGCCTCGCCACCGGCGGCGGCGCCCTGCTGCTCGCCGCCGACGGCCGTGCCGACGCTGCCGGGGCGGCGTTGCTGGCCGCGGCGCTGGCGTTGCACTGGCTGCGCGCCGGACGCGCCGCGCCGGCCTGA
PROTEIN sequence
Length: 787
MRETETRVELTEEELETLSSDNEGGPAAKVTGWLGWLTAAALFALSAYALYWTQFSVNTTVYRVSFLAVVLMLVFLLYPIVRGEPHRPRPATPEEWLCGLVGVACCVALAAQSGIFSRSPWAGLQLALVALCFGLAPFATRSRVLIETRALDWILVGLTLATALVLSLTIDDYKARPTRPTPEELVLGGALMLFVLEASRRTVGWVLPAIALAFLLYCSFGPWMPEPFDHRGFSLGRIIGQNALTLEGLFSTPLDVASSFIILFTIYGAVLERGGAGKFFIDWAFALFGKRPSPSAPGRAVVTSGFLLGTVSGSGVATTVTIASLAWPMLRRSGYTPNVAGGMLSAAGIGATLSPPTLGAAAFIIAEYLNVDYLDILVYATIPTLLYYLACWLTTEADARKLGVKPVKTSDASLWELTRREGYHFLSLAAIAVFLLLGFTSFMAVFWSIAIAFALSMIRPHSRLVTPSAFVLGLAAGAAAWIAGRSGAAAGLGLGNLFDARLSVAVFWGMAAAVAASGVQTLLARRAGREADPAATRMIAALVDGARALLGIGAICACAGIIVSVVNLTGLGLTISSIIVTLGGGDRLAVILLAAVAMWVLGTAVPVTASYIIAAVMLVPALTNVGVPEAAAHMFMFYYAVLADVSPPTALAPFAAAAITGGTPFNTMLQAWKYTLPAFLVPFMFCLTPNGLGLLMLTPDGHWPITAIDWLAVLITTLTSCLALLGLSVGATGYALRPVNAVERCLATGGGALLLAADGRADAAGAALLAAALALHWLRAGRAAPA*